Gene Dde_3326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3326 
Symbol 
ID3758303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3311634 
End bp3312731 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content58% 
IMG OID637784239 
Productphosphonate ABC transporter inner membrane protein 
Protein accessionYP_389815 
Protein GI78358366 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3639] ABC-type phosphate/phosphonate transport system, permease component 
TIGRFAM ID[TIGR01097] phosphonate ABC transporter, permease protein PhnE 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAC TGACCCTCGA ACAGCTCACC CCGAGAAAGA CCCTCACCCA GAGGGTCCTT 
CTCGGACTCA TGAGCCTCAC TGTAGCAGCA GTCCTTGCCG TAACGTACGT GTGGTGCGGC
ATCGACCCCG TCAAACTGTA CGAAAAACGC AACAACGCCG TGGAATACCT GTTCGGGCAC
AGCATTTCAG ATGCCGACAG AACGGCTGCC ATGGAACAGG CACGCAGGCT GCCCGCCATC
ATCATCCATC AGGAAGCCAT GGACGAAGTG CGCAAAGAAA TGGCTGCCAA AGGCTCCGCG
GACTTTACGG AAATGACCGG ACGCGGCAAC GAACTGGCCG AAAAAAGGCT GGCCGCGATG
GACCCTGCGG CATTCGACGC CATAGTGCAG GAAGAATACG AACGGGTGCT GGATGAAAAG
CGCGGCGGAT TCTTTCCTCC GGAAATGCGT ACCGGCCCCC TGATGCAGTA CAGCCGCGCC
CTGATTGAAA CCATTGCCAT AGCCATATGG GGCACGCTGC TGGCTTTTGT GGCAGCCATT
CCCGCATCCA TGCTGGCGGC GCGCAACACG CTGTGTCTTA TTCTGCCGGG CAGTTCGCCC
GCCCGCAAAA AGCTGCGCCG CAGCATCCAG TTTGCCATGC GGCGGCTGCT CGACTTCTGC
CGCGGATTCA ATGAATTCGT CATGGCCCTC ATTTTCGTGG CAGTCATCGG TCTGGGGCCT
TATGCCGGGG TGCTGGCCCT TGCCATCCAC TCGTTCGGCA TTCTCAGCAA GGTGTTCAGC
GAAGGTATCG AAGCCATCGA ACCCGGTCAG GTGGAAGCCG TGGAAGCCAG CGGCGCCAGC
TCGGTACAGA CCATTGTCTT TTCCGTGCTG CCGCAGATGA TGCCGCTCAT TGTCAGCTAC
AGCCTGCTGC GCTTTGAAAC CAACGTGCGC AGCGCCACCA TTCTGGGATT TGTGGGTGCC
GGCGGCATAG GCTTTCTGAT TTTCGACAAG CTGAACGGCT ACCTGTACCG CGAAGTAAGC
ACCATGATGA TTCTGGTCAT CCTCATGGTC ACCGTCATCG ATTACATGTG CGGCATCATC
CGCAGCAGGT TTGTATAA
 
Protein sequence
MSELTLEQLT PRKTLTQRVL LGLMSLTVAA VLAVTYVWCG IDPVKLYEKR NNAVEYLFGH 
SISDADRTAA MEQARRLPAI IIHQEAMDEV RKEMAAKGSA DFTEMTGRGN ELAEKRLAAM
DPAAFDAIVQ EEYERVLDEK RGGFFPPEMR TGPLMQYSRA LIETIAIAIW GTLLAFVAAI
PASMLAARNT LCLILPGSSP ARKKLRRSIQ FAMRRLLDFC RGFNEFVMAL IFVAVIGLGP
YAGVLALAIH SFGILSKVFS EGIEAIEPGQ VEAVEASGAS SVQTIVFSVL PQMMPLIVSY
SLLRFETNVR SATILGFVGA GGIGFLIFDK LNGYLYREVS TMMILVILMV TVIDYMCGII
RSRFV