Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3317 |
Symbol | |
ID | 3758294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 3302685 |
End bp | 3304574 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637784230 |
Product | asparagine synthase, glutamine-hydrolyzing |
Protein accession | YP_389806 |
Protein GI | 78358357 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCGGAA TAGCAGGATA TTGCGGCGCC TGTGGCGTTG CTGACACCAC AGAAAAGGAA TGTGCCGGAC GTCTTGAGGC GCTGCTGGCC GGTATTGTCC ATCGCGGTCC CGATGATGCG GGCATTACCT GTGCGCATAA TGTGGCCATA GGCATGCGGC GGCTTTCCAT CATCGACCTT GCTGGCGGGC ATCAGCCCAT GTTGTCCGGA GACGGCCGCT ATGCGCTGGT GTTCAACGGC GAAATATACA ACTTCAGAGA ACTGCGCAGC GAACTGGCGG AGGCGGGATA CTCATTCGCC ACGAACAGTG ACAGCGAAGT ACTGCTCAAG GGGTATATGG CGTGGGGCAG GGGGGTTCTT GACCGGCTTG ACGGCATGTT CGCCTTTGCC GTGCATGACA GACATGCCGG TACAGTGTTT CTGGCGCGTG ATCATCTGGG TATCAAGCCG CTGTATTACA TCCATTTGGG CGGGGTGTTT GCTTTCTGTT CCGAACCTGC TCCGCTTCTG GAACTGCCGC AGGTCCGCCG CAGGCTTGAC CACGACGCGC TGGCAGCGTT TCTGAGCTTT AAGTATGTGC CCGCACCGGA TACGTTTATC AAGGATATCA AAAAGCTCGC AGCAGGCCAC ACGCTTGAGT ATTCGCCGCG CGGCGACATG TTGCGCACGG AGCGTTACTG GCAGCTGCAG GGCCGCGAAG GCAGCAGTGA TGCGGGCGAA CTGGCTGAAA GACTGACCCG TGCGGTTGAC AGCCAGATGG TCAGCGATGT GCCGCTGGGG GTTTTTCTGA GCGGCGGCAT AGACAGCGGG CTGCTGACAT GGGCCGCCGC AGGGCAGGGC GGAGAGCATT TCACGGGCGG CTATACCGTA GCCTTTGACG AGACAGGCCG TAAAAAAGGC CTGCGCGCGG GCGGTTCATT TGATGAAAGC CGTCTGGCCG CCCTGAGTGC CGCGCATCTG GGTGTGCCTC TTTCCAGCAC TACGCTTGCA AGTCCGGCAC AGGCGACACT GGATGACTGG ATACGGCGGT TTCAGGAGCC GTTTGCCAAT ACCAGCATAC CGGCCAATTT TTTGCTGTGC CAGTGGGTTG CCCGGCACGT CAAAGTCGCC CTGAACGGTT CAGGTGCCGA TGAGCTTTTC GGCGGGTATG ACAGGTACTA CGCCGTGCAT CCTCCGGCAG CCCTGCGCGC CCTGCACTGT GCGGCGCCGC TGCTGCGGCG TGTGGCGGAC ATGCTGCCGG TAGGGGGCGG AAAGAACTCT CTGGTGCACC GTGCCAGACG CTATCTGGCA GGCTGTGCAC TTGCCCCCGC GCAAAAACAT GCCGGCAGCA TCAGACTGTT TACCGATACC CAGCTTGCAG CCATTGCTCC CGGTGTTGTG CCGGCGACTT TTGTACAGGA TGCTTTTGCC GGTGCGCCTC AGGGCAGCCT GCTGTACAAG GCCACGTGGA CAGATATGCA GACCATGCTG CCGGACGACT ATCTGACTCT GGTGGACAGA ACCAGCATGG CGGCTTCGCT GGAAGTACGT GTACCGTTTC TTGCCAGGGA TTTTGTGCAG TACGCCTTTT CATTGCCGCC GGCCGCAAAG ATTGCGGGGT GGAAAAAGAA AACCGCCCTG CGTGCGCTTG CCGCAAAGCA CCTGCCCGAA GACATTGCAC GCCAGCCTAA AATGGGGTTT GAATCGCCGG TGGGCCGGTG GTTCCGTGAC GGGCTGGGTG AGGCACTGTG CCGGCAGCTG GCGCAAAGCC CGCTGCAGAA TATTATATCG GTACGGGGGG TGCAGGCGCT GGCACAAAGC CACAGCGCCG GTCAGGTGGA CGCAGCCAAG CCGCTTCTGG CGTTGTATAC CCTTGTGCGC TGGATGGATA TGTACAGGGT GGAACTTTAG
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Protein sequence | MCGIAGYCGA CGVADTTEKE CAGRLEALLA GIVHRGPDDA GITCAHNVAI GMRRLSIIDL AGGHQPMLSG DGRYALVFNG EIYNFRELRS ELAEAGYSFA TNSDSEVLLK GYMAWGRGVL DRLDGMFAFA VHDRHAGTVF LARDHLGIKP LYYIHLGGVF AFCSEPAPLL ELPQVRRRLD HDALAAFLSF KYVPAPDTFI KDIKKLAAGH TLEYSPRGDM LRTERYWQLQ GREGSSDAGE LAERLTRAVD SQMVSDVPLG VFLSGGIDSG LLTWAAAGQG GEHFTGGYTV AFDETGRKKG LRAGGSFDES RLAALSAAHL GVPLSSTTLA SPAQATLDDW IRRFQEPFAN TSIPANFLLC QWVARHVKVA LNGSGADELF GGYDRYYAVH PPAALRALHC AAPLLRRVAD MLPVGGGKNS LVHRARRYLA GCALAPAQKH AGSIRLFTDT QLAAIAPGVV PATFVQDAFA GAPQGSLLYK ATWTDMQTML PDDYLTLVDR TSMAASLEVR VPFLARDFVQ YAFSLPPAAK IAGWKKKTAL RALAAKHLPE DIARQPKMGF ESPVGRWFRD GLGEALCRQL AQSPLQNIIS VRGVQALAQS HSAGQVDAAK PLLALYTLVR WMDMYRVEL
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