| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3305 |
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| Symbol | |
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| ID | 3758282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 3290827 |
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| End bp | 3292464 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637784218 |
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| Product | choline/carnitine/betaine transport |
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| Protein accession | YP_389794 |
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| Protein GI | 78358345 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGAAC AAAGCAACAA AAACTCCACT CCTGAAGCAG ATACGAAACC GAGCTGGTTT
CATCTGGAAG TACATCCGTG GGTCTTTTTC GGCTCCGCGG GGCTTATCTT CCTCTTCGTC
GGCATCACCT TAGTTTTCCA GCATTTTCTT GGCGACGTAT TCCAGACGAT GCAGTCCTAC
ATGTCCACCT ACACGGGCTG GTTCTTCATC GCCACGATGA ACATTGTACT GCTGTTTGTT
CTGCTGCTTA CTGTCAGCCG CTACGGAGAC ATCCGACTGG GCGGTCCCGA TGCCGAGCCA
GAATTTTCCA CCATGGCGTG GTTTGCCATG CTGTTTTCCG CCGGCATGGG CATCGGCCTG
CTGTTTTACG GAGTGGCAGA ACCCATGTTC CACTATGTTG CCAATCCGCT GACAGAACCG
GGAACAACGG AAGCCGCCCG CAAAGCCATG GACATCACGT TTCTGCACTG GGGCCTGCAT
CCGTGGGCTG TGTATAGCGT TGTCGCCCTG TCGCTGGCCT TTTTTTCATT CAACAAAGGG
CTGCCCCTTT CCATCCGGAC CGCATTCTAC CCCGTGCTGG GCGAGCGGAT TTACGGCCCT
GTGGGCAACG CCATCGATAT CATGGCCACG GTGGCAACCC TGTTCGGGGT GGCCACGTCG
CTGGGTCTGG GAGTCAAGCA GGTCAATGCG GGACTGGACC ATCTGTGGGG TATCGGACAG
TCCACGGGCA TTCAGGTCAT TCTTATTGCG GCCATCACCG CTGTTGCCAC ATGGAGTGTC
GTCGCAGGTC TTGACAAAGG CATCCGCCGG CTGAGTGAGA TCAACATCGT TCTTGCCGGC
ATGCTGGCGC TGTTTGTGCT TTTTCTCGGT CCCACGCTTT TCATCCTTAA CGCCACACTG
GAAAACATAG GCTATTACAT TCAGTTTCTG CCGCAGCTTT CCACATGGAA CGAGACATAT
GAACATACCG AGTGGCAGCA CGGCTGGACC ATTTTTTACT GGGCCTGGTG GATCGCCTGG
TCACCTTTTG TAGGCATGTT CATCGCCCGG GTATCTTTCG GGCGCACCAT CCGCGAATTC
ATCATGGGAG TCATGCTGGT ACCCACGTTC ATCACGTTTC TGTGGATCAC CATCTTCGGC
AACACAGCAC TGAACATCGA AATGTTCGGG GCAGGCGGCA TTGCCACCGC CGTGCAGGAA
AACCTGCCGG TATCCCTTTT CGTCATGCTG GAAAACTTCC CGCTCAGCTC TGTCACCTGC
TTTCTGGGCA TCGTGGTGGT CATAACCTTC TTTGTGACCT CTTCCGACTC CGGCTCCATG
GTCATTGACA TCATAACTTC GGGCGGAGAC CCCAACCCGC CTGTTCTTTC ACGCCTTTTC
TGGGCGTTGC TCGAAGGCGT TGTGGCCGCG GTGCTGCTGA TGGGCGGCGG ACTGGTGGCG
CTGCAGACAG CCACCATCAC CACGGGGCTG CCTTTTGCGG TCATCCTGCT CGGCATGTGC
TATTCACTGC ACAAAGGGCT CAAAGAATAC TCCGGCCCGC AGGAATTTAC GCTGGGTATT
CCCAAGCAGC AGGTACGCTT CCGGGTGAAG CGCAAACCTG TACTGGACAG AACCTTCGGG
AGGCGCAAGT TCTGGTAG
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| Protein sequence | MNEQSNKNST PEADTKPSWF HLEVHPWVFF GSAGLIFLFV GITLVFQHFL GDVFQTMQSY
MSTYTGWFFI ATMNIVLLFV LLLTVSRYGD IRLGGPDAEP EFSTMAWFAM LFSAGMGIGL
LFYGVAEPMF HYVANPLTEP GTTEAARKAM DITFLHWGLH PWAVYSVVAL SLAFFSFNKG
LPLSIRTAFY PVLGERIYGP VGNAIDIMAT VATLFGVATS LGLGVKQVNA GLDHLWGIGQ
STGIQVILIA AITAVATWSV VAGLDKGIRR LSEINIVLAG MLALFVLFLG PTLFILNATL
ENIGYYIQFL PQLSTWNETY EHTEWQHGWT IFYWAWWIAW SPFVGMFIAR VSFGRTIREF
IMGVMLVPTF ITFLWITIFG NTALNIEMFG AGGIATAVQE NLPVSLFVML ENFPLSSVTC
FLGIVVVITF FVTSSDSGSM VIDIITSGGD PNPPVLSRLF WALLEGVVAA VLLMGGGLVA
LQTATITTGL PFAVILLGMC YSLHKGLKEY SGPQEFTLGI PKQQVRFRVK RKPVLDRTFG
RRKFW
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