| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3239 |
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| Symbol | |
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| ID | 3758214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 3232872 |
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| End bp | 3234254 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637784150 |
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| Product | glycolate oxidase, subunit GlcD |
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| Protein accession | YP_389728 |
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| Protein GI | 78358279 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAGTG AATCCCTTAT CAAGGAATTT AAAACCATCG TCGGTGACGA GAACGTTTTC
GACAACGAAG CAGACCGCCA GTGCTATTCG TACGACTCTG CCGTGCTTGA CGCCGTTGTC
CCTGCACTGG TTGTGCGCCC GACCGAGACC ACTCAGATCG GTCAGGTGGT CAAGCTGTGC
AACGAAAACG GTCTGCCCAT CACCGTGCGC GGCGCAGGTA CCAACCTGTC CGGCGGCACC
ATTCCCGACC CGCGCGACGG CGTGGTTGTA CTGACCAACG GCCTGACCAA AATTCTGGAA
ATCAACGAGC AGGACCTGTA CGCCGTTGTT CAGCCCGGTG TGGTCACCGC CAAGTTTGCT
GCCGAAGTGG CCAAACGCGG CCTTTTCTAC CCGCCCGACC CGGGTTCGCA GGCTGTTTCC
ACCATCGCCG GTAACGTGGC GGAAAATGCC GGCGGTCTGC GCGGTCTGAA GTACGGCGTG
ACCAAAGACT ACGTCATGGG CATCGAATTC TACGATGTAA ACGGCGGTCT GGTGAAAACC
GGTTCCCGCA CTGTAAAGTG CGTCACCGGC TACAACCTTG CGGGCCTGAT GGCTGCCTCC
GAAGGCACCC TTGGCGTGTT CAGCGAAATC ATTCTGAAGC TGGTTCCGCC GCCACGCGCC
TCCAAGGCCA TGATGGCTGT TTTCGACGAC ATCAACAAAG CATCCGAAGC CGTTGCCGGC
ATCATTGCCG CGCACGTTGT GCCCTGCACC CTTGAGTTCA TGGACCAGGC CAGCATCCGC
TACGTGGAAG ACTACACCAA GGCCGGACTG CCCGTACACG CCGAAGCCAT CCTGCTCATC
GAGGTGGACG GTCACCCCGG TCAGGTGGAA GACGACGCCG CCCGCGTGGA ACAGGTGCTC
AAGAGCACCG GTGCCGAAAT TCAGGTGGCC AAGGACGCCG AAGAAAAGTT CAAGCTGTGG
GAAGCACGCC GCAATGCGCT GCCCGCCCTC GCCCGTGCCA AACCGACCAC CGTACTCGAA
GACGCCACCG TGCCGCGGTC GCAGATTCCT GCCATGGTCA AGGCCATCAA CGACATCGCC
GCCAAGTACC AGATCAACAT CGGTACCTTC GGCCATGCCG GCGACGGCAA CCTGCACCCC
ACCATTCTGT GCGACCGCAG AGACAAAAAG GAATTCGAAC GCGTGGAACA CGCCGTGGAC
GAAATCTTCG ACGTGGCACT GTCGCTCAAG GGTACGCTGT CCGGCGAACA CGGCATCGGC
ATGGCCAAGT CCAAATGGAT GGAAAAGGAA ACTTCCAGAG CCACCATTGA CTTCTCGCTG
AACATGAAGC GGGCCATCGA CCCCAACAAC ATTCTCAATC CCGGCAAGAT CATCGGAGGC
TAA
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| Protein sequence | MLSESLIKEF KTIVGDENVF DNEADRQCYS YDSAVLDAVV PALVVRPTET TQIGQVVKLC
NENGLPITVR GAGTNLSGGT IPDPRDGVVV LTNGLTKILE INEQDLYAVV QPGVVTAKFA
AEVAKRGLFY PPDPGSQAVS TIAGNVAENA GGLRGLKYGV TKDYVMGIEF YDVNGGLVKT
GSRTVKCVTG YNLAGLMAAS EGTLGVFSEI ILKLVPPPRA SKAMMAVFDD INKASEAVAG
IIAAHVVPCT LEFMDQASIR YVEDYTKAGL PVHAEAILLI EVDGHPGQVE DDAARVEQVL
KSTGAEIQVA KDAEEKFKLW EARRNALPAL ARAKPTTVLE DATVPRSQIP AMVKAINDIA
AKYQINIGTF GHAGDGNLHP TILCDRRDKK EFERVEHAVD EIFDVALSLK GTLSGEHGIG
MAKSKWMEKE TSRATIDFSL NMKRAIDPNN ILNPGKIIGG
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