| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3231 |
|---|
| Symbol | |
|---|
| ID | 3758206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 3220124 |
|---|
| End bp | 3221182 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637784142 |
|---|
| Product | putative signal transduction protein |
|---|
| Protein accession | YP_389720 |
|---|
| Protein GI | 78358271 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1639] Predicted signal transduction protein |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACGAAA CCTCACACTC TCTGGAATAT GAGGCTTTTA TCGAGGAAGC GCGTCATGTG
GTGGAGGCCC GTTTCGGCCA CACGGGGACA ACCGGCGAGG TGCCCCGTCT GCTGCTGCGT
CACGGCACGG TGCGCATGGC CAGAGACATG GCCCGCGGAA TACGTCCCTG TCAGGTGAAG
ATGCCTGATG TTTCCGGCCT GCAGTACGGC GATTTTGCCC CGCTGGACCC GCTGGCGCTG
CTGCGTGACG AGGTTAAACT GCCGTCGCTG CCGGCGGTGG TGGCCGAACT GCGCGATGTG
CTTTCCAGCC CGAACAGTTC CGCGGCTGAC GTGGCGCGGG TGATCAGCCG CGATGCGGGG
CTGTCGGCAT TTCTGCTGCG CATGGTCAAC AGCGCTTTTT ACAGCTTTCC TTCGCGTATA
GACACGGTAT CGCGTGCCGT GGCGCTGGTG GGGCGGCAGC AGCTGTCAAC ACTGGCGCTG
GGTGTCATGG TCATAGGGGC CATGCGCGAT CTGCCCGTGG CGCATCTTGA TCTGTCGCTT
TTCTGGCAGC ACAGCATCGC CTGTGCCGTG GTGGCCGGCC AGCTGGCAGA GGCTGCGGGC
ATGGAGGAGC CGGAACGCTT TTTTGTGGCC GGTCTGCTGC ACGATATAGG CAGACTTGCG
GTGTTCAGCC TGTTACCCGA CCGTGCGGCG GCCATTCTTT CCATGTGCAG CGATTACGGC
ATGCCGGCGC AGGACGCCGA ACTGCGGGTG CTGGGTTTTG ACCATGCCAC GCTGGGAGGC
ATGCTGCTGC GCAAGTGGAA TTTTCCCATG TCGCTGGTTT TTTCCACCCT GCATCATCAT
GTGCCGGAAC GGAGTGTCCG CCATGTGGAG CCTGCGGTGG TTCATGTGGC GGATGTGGTG
GTGAAGGGAC TGGGTATAGG TGTAAGCGGC ATGCACCAGC TGCCGGGATT CAAAGAAGAT
GCATGGCAGC GTCTGGGGGT CTCTGTGGCG GTGCTGGAAC AGCTTATTGA CGGGCTGGAA
GAGCGTCTGC GCGATACTTC GTCGCTGCTG CTCGAATAG
|
|---|
| Protein sequence | MNETSHSLEY EAFIEEARHV VEARFGHTGT TGEVPRLLLR HGTVRMARDM ARGIRPCQVK
MPDVSGLQYG DFAPLDPLAL LRDEVKLPSL PAVVAELRDV LSSPNSSAAD VARVISRDAG
LSAFLLRMVN SAFYSFPSRI DTVSRAVALV GRQQLSTLAL GVMVIGAMRD LPVAHLDLSL
FWQHSIACAV VAGQLAEAAG MEEPERFFVA GLLHDIGRLA VFSLLPDRAA AILSMCSDYG
MPAQDAELRV LGFDHATLGG MLLRKWNFPM SLVFSTLHHH VPERSVRHVE PAVVHVADVV
VKGLGIGVSG MHQLPGFKED AWQRLGVSVA VLEQLIDGLE ERLRDTSSLL LE
|
|---|
| |