Gene Dde_3222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3222 
Symbol 
ID3758197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp3211979 
End bp3213055 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content62% 
IMG OID637784133 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_389711 
Protein GI78358262 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATGC GCATATGCCT GCTTGCCGGT GACGGCATAG GGCCGGAGAT AATGGAACAG 
GGCGTGCGGG TGCTGGAAAC CGTGGCCGGA AAATTCGGCC ACGACATGGA ATTTACCGAT 
GCGCTTATCG GCGGAGCGGC CATTGACGAA ACAGGCGATC CCCTGCCGCA GGAAACCGTG 
GAAGCCTGCA AAGCGGCCCA AGCCGTGCTG CTGGGTGCTG TGGGCGGCCC CCGCTGGGAC 
AACCTGACCG GCGCCGAACG ACCCGAAGCC GGTCTGCTCG GCATCCGCAA AGCTCTCGGC 
CTGTTTGCCA ACCTGCGCCC CGCAAAACTT TTTCCCGAAC TGGCAAGCGC CTGCTTTCTG 
CGGCCTGACA TAGTTGCCAA CGGCATTGAT GTCATGGTGG TACGCGAACT GACCGGCGGC 
ATTTATTTCG GCACTCCGGC CGGTGAAGAA ACCCGTGACG GCCTGCGGAC CGCCTTTAAC 
ACCATGGTGT ACAACGAAGA AGAAGTCCGC CGCATCGCCC GCGTGGCTTT TGAAGCCGCC 
CGCAAGCGCT CCGGCAGGGT CTGCTCGGTG GACAAGGCCA ACGTGCTGGC CGTGTCGCGT 
CTGTGGCGCG AGATAGTCAC AGCCACCCAC GCCGACGAAT TCCCCGACGT GGAGCTTTCG 
CACATGTATG TTGACAACGC GGCCATGCAG CTGGTGCGCG ACCCATCGCA GTTTGACGTC 
ATCGTGACCG GCAACCTGTT CGGCGACATT CTTTCGGATG AAGCTTCGGT CATCACCGGT 
TCCATTGGCA TGCTGCCATC GGCTTCGCTG GGTGCCGGAG GGCCCGGACT GTTCGAACCC 
ATCCACGGCT CCGCCCCCGA CATCGCCGGG CAGAACAAAG CCAACCCGCT GGCTACCATT 
CTTTCCACAG CCATGATGCT GCGCCACAGC TTCGGGCTGG AAAAAGAAGC CGAAGCCGTC 
GAAGGCGCCG TGCAACAGGT ACTCAAAGCC GGCTACCGCA CCGGTGACAT AATGGATCAG 
GGCGGCACGC TGGTGGGATG CAACACCATG GGCAACCTTG TCAACGAACG CATCTGA
 
Protein sequence
MEMRICLLAG DGIGPEIMEQ GVRVLETVAG KFGHDMEFTD ALIGGAAIDE TGDPLPQETV 
EACKAAQAVL LGAVGGPRWD NLTGAERPEA GLLGIRKALG LFANLRPAKL FPELASACFL 
RPDIVANGID VMVVRELTGG IYFGTPAGEE TRDGLRTAFN TMVYNEEEVR RIARVAFEAA 
RKRSGRVCSV DKANVLAVSR LWREIVTATH ADEFPDVELS HMYVDNAAMQ LVRDPSQFDV 
IVTGNLFGDI LSDEASVITG SIGMLPSASL GAGGPGLFEP IHGSAPDIAG QNKANPLATI 
LSTAMMLRHS FGLEKEAEAV EGAVQQVLKA GYRTGDIMDQ GGTLVGCNTM GNLVNERI