Gene Dde_3161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3161 
SymbolnusA 
ID3758136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3147059 
End bp3148348 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content58% 
IMG OID637784072 
Producttranscription elongation factor NusA 
Protein accessionYP_389650 
Protein GI78358201 
COG category[K] Transcription 
COG ID[COG0195] Transcription elongation factor 
TIGRFAM ID[TIGR01953] transcription termination factor NusA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00111335 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATGG AATTGAAAAA AGCCATAGAC CAGATCAGCA AAGACCGGGG GCTGGACCGG 
GCACTGCTGA TCGAAACGCT GGAAGAAGCG GTACGTACCT CCGTCATCCG CAAATACGGC
GATGAGCTGG ACCTTGAAGT CAACTTCAAT GAAGAAACAG GCGAAATCGA GGTTTACCAG
TTCAAAATCG TGACGGAAGA AGTGGAGGAC GAGGCTTCGC AGATTTCTCT GGAAGACGCC
CGCGCACACG ACCCCAGCGT CCAGCTTGAC GACGAGATGG GCTTTCGCCT GAAAATCGAA
GATCTGGGCC GTATTGCCGC CCAGTCCGCC AAGCAGGTCA TCATCCAGCG CATGCGGGAT
GCCGAGCAGG AAATCATATA CGAAGAATTC AAGGACCGCC TGAACGAAGT CGCCAGCGGC
ATCATTCAGC GCAGAGACAA AACCGGCTGG ATCATCAATC TGGGCCGTAC CGAAGCGCTG
CTGCCCAAAG ACGAACAGAT TCCGCGCGAA CACTACAAGC GCGGCGACCG CGTGCAGGCC
ATCATCATAG AAGTGCGCAA GGAAGGCCGC GGCCCGCAGG TTGTGGTATC CCGTTCGCAC
CCCGACTACA TGGCCGCGCT GTTCAAACGC GAAGTGCCCG AAGTGGATGA CGAAACCGTT
CAGGTGATGG GTGTTGCCCG CGATCCGGGC AGCCGCGCCA AAGTGGCTGT CACCTCGCGG
GACCGCGATG TCGATCCGGT GGGTGCCTGT GTGGGCATAC GCGGTTCGCG CATTCAGAAT
ATCGTGCAGG AACTGCGCGG CGAACGCATC GACATAGTGG TGTGGAGTCC CGACATCGCA
ACCTATGCAC GCAACGCCCT CAGCCCCGCC GTGATCAGCC GCATCATTGT GGACGAAGAG
GAAAACATGC TCGAAGTGGT TGTGCCTGAC GATCAGCTGA CCAATGCCAT CGGCAGAAAG
GGTCAGAACG TCAAACTGGC ATCCAAACTG CTGGGCTGGA AAATAGATAT TTACACCGAG
ACCCGCTACA ACGAAGCCAA CGCCATAGGG CGCGGTCTCG AACAGCTGGC CAGCGTGGCC
GAAGTGCCCA TCGAGCAGTT TGTGGCCGCG GGCTTCTCGT CCATAGAAGA GCTGCGCGAC
GCCACAGACG AAGAGCTGAT GGCCGTGGAA GGCCTTACTC CCGGAAAGAT CTCGGATCTG
CGGGCTGCCA TCAACTTCCT TGCCCCTGTA CAGCGCAACG CTGAAGACGG AGAGGAAGAA
GAAGCCGCTG ACGGGGAAAA CGCCGAATAG
 
Protein sequence
MSMELKKAID QISKDRGLDR ALLIETLEEA VRTSVIRKYG DELDLEVNFN EETGEIEVYQ 
FKIVTEEVED EASQISLEDA RAHDPSVQLD DEMGFRLKIE DLGRIAAQSA KQVIIQRMRD
AEQEIIYEEF KDRLNEVASG IIQRRDKTGW IINLGRTEAL LPKDEQIPRE HYKRGDRVQA
IIIEVRKEGR GPQVVVSRSH PDYMAALFKR EVPEVDDETV QVMGVARDPG SRAKVAVTSR
DRDVDPVGAC VGIRGSRIQN IVQELRGERI DIVVWSPDIA TYARNALSPA VISRIIVDEE
ENMLEVVVPD DQLTNAIGRK GQNVKLASKL LGWKIDIYTE TRYNEANAIG RGLEQLASVA
EVPIEQFVAA GFSSIEELRD ATDEELMAVE GLTPGKISDL RAAINFLAPV QRNAEDGEEE
EAADGENAE