| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3109 |
|---|
| Symbol | |
|---|
| ID | 3758778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 3099442 |
|---|
| End bp | 3100170 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637784019 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_389598 |
|---|
| Protein GI | 78358149 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2013] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00266] conserved hypothetical protein TIGR00266 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGCC ATGAAGTGGA ATACAGGATA ACGGGGGGCG ACCTGCAGGT GGTGGAAGTG
GAACTGGACC CCGGTGAGAC AGTCATAGCC GAAGCCGGAG CCATGTGCTG GATGGACGGG
GACATTGAGT TTGCCGCCCG CATGGGCGAC GGTTCCGCGG CGGACGGCGG TTTTTTCGGC
AAGCTGCTGG GAGCGGGCAA GCGGCTGGTC ACGGGTGAGT CGCTGTTTAT GACGCACTTT
ACCAATCAGG GGCAGGCAAA GGCCTCCGTG GCTTTTGCCG GTCAGGTGCC GGGGCATGTG
GTGCCTGTTG ATCTGGCGGA AATCGGCGGC GAGCTTATCT GTCAGCGCGA TGCTTTTTTG
TGCGCGGCGC GCGGCACCCG CATCGATGTC GCTTTCAGCA AGCGTCTGGG AGCGGGATTT
TTCGGTGGTG AAGGATTTGT ACTGCAGCGG CTGCGCGGTG ACGGTCTGGC CTTTGTGCAT
GCGGGCGGCG CCGTGGTGCG CAAGGAACTG CACGGCGGTA CGCTGCGGGT GGACACAGGC
TGCCTCGTGG CTTTCACACC GGGGGTCAGC TACGATATCG GACTTTCCGG CGGGCTGAAG
TCCATGATGT TCGGCGGCGA AGGGGCGTTT CTGGCGGCAT TGTCCGGACA CGGTACGGTG
TTTTTGCAGA GCATGCCCTT CAACCGTCTT GCCGACCGTA TCACGGCACT GATTCCTGAA
AAGAAATAA
|
|---|
| Protein sequence | MESHEVEYRI TGGDLQVVEV ELDPGETVIA EAGAMCWMDG DIEFAARMGD GSAADGGFFG
KLLGAGKRLV TGESLFMTHF TNQGQAKASV AFAGQVPGHV VPVDLAEIGG ELICQRDAFL
CAARGTRIDV AFSKRLGAGF FGGEGFVLQR LRGDGLAFVH AGGAVVRKEL HGGTLRVDTG
CLVAFTPGVS YDIGLSGGLK SMMFGGEGAF LAALSGHGTV FLQSMPFNRL ADRITALIPE
KK
|
|---|
| |