| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3097 |
|---|
| Symbol | |
|---|
| ID | 3758091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 3086421 |
|---|
| End bp | 3088028 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637784007 |
|---|
| Product | two component Fis family transcriptional regulator |
|---|
| Protein accession | YP_389586 |
|---|
| Protein GI | 78358137 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCAGA TTCTCCTCGT AGACGCAGAC TCAGGTTTTG CCCACATGCT GGGTGCCATC
ATAGAGGGAC TGGGGCACAG GGTACACCAC GCCGCATCGC TCAGGGAGGG ACGAGCCCTT
GCCGCTGCGG CCGAAACCGA TGTGGTGTAT CTGCATGTTC AACTGCCCGA CGGCAGCGGT
ACAACCGCGG TGGAATCGTT CCGGTCGGCC CCCGGCCGTC CGGAGGTGGT GCTGCTGACA
GACCACGGCG ACCCCGACAC CGCGGAAGAA GCAATCCGCA TGGGAGTCTG GGAATATGTG
GAAAAAAGCA GTCCGGCTGA CAGGATAATT CTGCCTCTGC TGCGTGCGCT TGACTACAGG
GGCAGACGGC CTTCGCGACG CAGTACGGCC AGCCTCAAGC GCGATGACAT CATCGGCAGC
AGCCGTGCCC TGCAAAAATG CCTTGATACC GTCTCGGAAG CTGCCTTCAG CGATGCATCA
GTGTTGCTTT TCGGCGAAAC GGGCGCAGGC AAGGAAGTAT TTGCACGCGC CATTCACGAC
AACAGCCACC GTGCCGGCGG TCCCTTTGTG GCCGTGGACT GCGCATCGCT CACCCGTACG
CTGGCGGGCA GCATACTCTT CGGCCACCGC AAAGGCGCCT TTACCGGTGC GGAACAAAAC
AAGGACGGTC TGGTGCTGCA GGCGCACCGG GGCACACTCT TTCTGGATGA GGTGGGCGAA
CTGCCTCTTT CCATGCAGAA GCTCTTTCTG CGGGTGCTTC AGGAACACCG CTTCCGGCCG
GTAGGCGGCA GAAACGAGGT GACCAGCGAT TTCCGTCTTA TCGCCGCAAC CAACCGGGAC
CTTGAAAAAA TGGTGTCGCA GGGCACATTC CGTTCCGACC TTTTGTACCG CATGCGCACC
ATTGTCATGC ATCTGCCGCC TCTGCGCAGC CGCACCGAAG ACATTACCGA ACTTGCCGAC
CACTACCTGC AACGCATGTG CGGCAAATAC GGCGTTCCGC ACAAAAGCAT GGCCCCCGAC
CTGCAGGAAA CGCTGCGCGC CTATGCCTGG CCGGGCAACG TCCGGGAGCT TATCCACACG
CTGGAACGTG CCGTACTTGC CGCACAGGAT GAACCACGGC TCTTTGCCCG CCACCTGCCT
GACCATGTGC GCATAAGCAC CGCGCGGGCG GCTTTGCAGC AACGCAGAAC AGACAGCACC
GCCGCTGCGC AGCCGTCCCG TGACGAAGAC ACCGCATCCG GTGCACCCGA AAGCCGCCCG
CAGGCACCGC GGCCGTGTCA TACCTGCGGC ACCCTGCCGG AATCTTACGG CACGCCCGCC
GTACAACCTG AGTCCACAGG CCAAGGCCTG CCGCACCTGC ACGACACTGC CGGACACAAT
GCCGCCGTCC CACAGGAAAA ACACCCTCTT TCTCCGGACC ACAGCCCCCT GCCGCCGTTT
TTCACCTTCC GCGACAACAT GTTCCGCGAC TACCTGCGCG AACTGCTGCG CCGTACAGAC
AACGACATCG CCGCGGCATG CGCCATGTCG GGACTTTCCC GTTCTTACCT GTATGACCTG
CTGCGGCGCC ACGGCCTGCG CAACGGCGGT ACAACATCCG GCAGCTAG
|
|---|
| Protein sequence | MAQILLVDAD SGFAHMLGAI IEGLGHRVHH AASLREGRAL AAAAETDVVY LHVQLPDGSG
TTAVESFRSA PGRPEVVLLT DHGDPDTAEE AIRMGVWEYV EKSSPADRII LPLLRALDYR
GRRPSRRSTA SLKRDDIIGS SRALQKCLDT VSEAAFSDAS VLLFGETGAG KEVFARAIHD
NSHRAGGPFV AVDCASLTRT LAGSILFGHR KGAFTGAEQN KDGLVLQAHR GTLFLDEVGE
LPLSMQKLFL RVLQEHRFRP VGGRNEVTSD FRLIAATNRD LEKMVSQGTF RSDLLYRMRT
IVMHLPPLRS RTEDITELAD HYLQRMCGKY GVPHKSMAPD LQETLRAYAW PGNVRELIHT
LERAVLAAQD EPRLFARHLP DHVRISTARA ALQQRRTDST AAAQPSRDED TASGAPESRP
QAPRPCHTCG TLPESYGTPA VQPESTGQGL PHLHDTAGHN AAVPQEKHPL SPDHSPLPPF
FTFRDNMFRD YLRELLRRTD NDIAAACAMS GLSRSYLYDL LRRHGLRNGG TTSGS
|
|---|
| |