| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3090 |
|---|
| Symbol | |
|---|
| ID | 3758084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 3080525 |
|---|
| End bp | 3081085 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637784000 |
|---|
| Product | phosphodiesterase |
|---|
| Protein accession | YP_389579 |
|---|
| Protein GI | 78358130 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0622] Predicted phosphoesterase |
|---|
| TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAC TATTTGTTTC CGACATACAC GGCAGTGCAG GCGCCGCCCG CACCGTGCTG
GAAAAAGCGG AGGCCATGCA GCCCGATGCC GTGGCCCTGC TGGGGGATGC GCTTTACCAC
GGCCCGCGCA ACCCGCTGCC CGCGGATTAT GATCCCAAAG GCGTGGCGGC ACTGCTTAAC
GGCTGGAAAA ACCGGATAGT GGCAGTGCGC GGCAACTGCG ACAGCGAAGT GGATCAGATG
CTTATCGAGT ACCCCATGAT GAGCGACTTC GCGTGGGTGC TGGCGGGCGG CCGCAGGCTG
TTTCTGACCC ACGGCCACAG GTATTCGCCC GATAACCTGC CGCCGCTGGC AGACGGTGAC
GTATTTGTCT ACGGGCATAC GCATGTGCCG CAGACCGGGA CAGCCGCACT TGCCGGCGGG
GGCGTGGTGC ACCTGTGGAA TCCCGGCTCG TGCTCGCTGC CCAAAAGCGG GTACGCGGCT
TCATACGCGG TGCTGGAAGA CGGAGTGTTC CGCGTATGCG GTCTGGACGG TTCCGTACTG
CTTACCGATA CGCTTGGCTA G
|
|---|
| Protein sequence | MKILFVSDIH GSAGAARTVL EKAEAMQPDA VALLGDALYH GPRNPLPADY DPKGVAALLN
GWKNRIVAVR GNCDSEVDQM LIEYPMMSDF AWVLAGGRRL FLTHGHRYSP DNLPPLADGD
VFVYGHTHVP QTGTAALAGG GVVHLWNPGS CSLPKSGYAA SYAVLEDGVF RVCGLDGSVL
LTDTLG
|
|---|
| |