| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3087 |
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| Symbol | |
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| ID | 3758081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 3075451 |
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| End bp | 3076536 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637783997 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_389576 |
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| Protein GI | 78358127 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAGC ATTCAGAAAC CAATACGGTA CGCTTCACCT GCGACCGCAA CGGCGTTATC
AGGCACGTTG TCTCGGACAA TGCAGGCCTG TTTGCCGGCA TAGACCTGCC ATTGCATATC
AACGACCTGA CCACAGCATC AGCACAAAAA CGCTACCACG CCTTTCTGGA CACGCTGACC
GCAGATGGAT TCGGCCTGTG CGATTCTCTT GTTCTGCGCG GCAGAACAGG TGTTCGGCAG
TTTGCCGTCT TTGGTGTCTG CAAAGGCGAC TGTTTTCATA TGATCGCGCT GCAATCGTCC
CCGCATATTA CAAACATTTT CAGCGAGTTA ATACATATGC TGAATGAACA GGGGGTGCTG
CTGCGGGCAA CGCAAAAAAA GGCTGCGGAA GCCCGCAGTA CGGGCAGCGA CAACGTGCAG
CTGCTTGAAG ACTACATGAT AATAAACAAC GAGCTTTCGC GGAACAAACG CGAGCTGGCA
ATCAGACACG AACAGCTGAA AAAAGCCTTC AGCGACATTG AGGAACTAAG CCGCACCGAC
CCGCTGACCG GAGCCTGCAA CCGCCGCAAG GTCATTGAAT TTCTGTCAGC GGAAATCGAC
CGCAGCAAAC GTTACGGCAC ACCGCTGTCC ATACTGAGCC TTGATATAGA CCGATTCAAG
GCCATCAATG ACACTTACGG GCACGCTGCC GGAGACGACG CGCTTATTGC ATTCTGCAGA
GTATGCAGGC AGCAGCTCAG AAAAACAGAC CTTTTCGGCA GAACAGGCGG CGAAGAGTTT
GTCGCCGTTC TTCCCCATGC CGCCTGTCGC GACGCACAAA TCTCGGCAGA GCGTATCCGC
CGCCATGTTG AACAGATACA CATTACGTAT AACAACGCAT GCGTGCGTTT TACAGTCAGC
ATCGGCATAG CCGTTCACGA GGCAGGGGAA AATACCGATA CGCTGCTGCG CAGGGCCGAT
GCCGCGCTTT ACAGGGCTAA AACAGCAGGC CGCAACACAG TCAGCGTGGC AGAAAAATCT
CCGGTAATGC CCGCAGAAAC TCCGCACGGG CACAGCCCGG AACAGCCCGC TGCCGGACAT
AAATAA
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| Protein sequence | MKQHSETNTV RFTCDRNGVI RHVVSDNAGL FAGIDLPLHI NDLTTASAQK RYHAFLDTLT
ADGFGLCDSL VLRGRTGVRQ FAVFGVCKGD CFHMIALQSS PHITNIFSEL IHMLNEQGVL
LRATQKKAAE ARSTGSDNVQ LLEDYMIINN ELSRNKRELA IRHEQLKKAF SDIEELSRTD
PLTGACNRRK VIEFLSAEID RSKRYGTPLS ILSLDIDRFK AINDTYGHAA GDDALIAFCR
VCRQQLRKTD LFGRTGGEEF VAVLPHAACR DAQISAERIR RHVEQIHITY NNACVRFTVS
IGIAVHEAGE NTDTLLRRAD AALYRAKTAG RNTVSVAEKS PVMPAETPHG HSPEQPAAGH
K
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