Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3084 |
Symbol | |
ID | 3758078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 3072872 |
End bp | 3074131 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637783994 |
Product | putative signal transduction protein |
Protein accession | YP_389573 |
Protein GI | 78358124 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGAAA ACAGCCGAAC TGCATCACAC CGTCCTGTTT TTTTTTCAAA GCAGCCGATA ATGGACTCGG ACCGCCGCAT ATGGGGATAC GAACTGCTGG GCGGAGAAAT CCAGCAGGGA ATTTTCACCG TATTCCCGGA GCACGAGGCA GCCGCAACCA GTCTTGGTTC CAGCGCCTAC TTCCGTCTGC AGGAAGACAT GGACCGCGGC AAACGCGTCA TGGTCGCATT TGATGCCGAA AGCATCATTC TGGGCATACC GCGCGCACTG CCGGCCAAGG CGGGTGTTGT GCGGGTCTCG CAGGAAGCGA CCAAGACAGA GGGCGTGCCC GAAGAACTGC GTGCGCTTAA AAAAGACGGA TACACCATTG CCATAGACTG CTCGCACGCC AACAGACCCG ACAAGGAATG CATGCTGCTT GCCGATGTGG TCTGCGTTGA TTTTTCCGTC AAGGCGGCCG TCATCGCATG CAGCCGCGGC GATGCTTCCA GCACCATGCT TGCCCGCGGC ATCCGCGACA ACGACATGTT CGAAGCCGCG CGCAGAATGG GCGTGGGGCT GTATCAGGGA CCTTTTTTCA AAGAACCGGA AATAACGGAA GGACAGGGAC TGTCTTCGCA TAAAGTGGCC CGGATAGAGC TGATGGCCAT TCTTGAATCG CCGGACCCCG ACCTGAAAGG CGTCGCAGAG GCTGTAAAGG CCGATGTGTC GCTCACATTC CGCCTTATTT CGCTGCTCAA CAGCTCCGCA TTCGGATTCC GGCAAAAAAT CGAATCTGTG GACCATGCCG TAAATCTGCT GGGGTGGAAT CAGACCCGCT CGTGGCTGCG GGCCGTTCTG GTGGCCGATA TGGCAGGTCA ATCCGAAGGT TCACAGGAAC TTGCGCTCAT CTCCATGCAG CGGGCGCGCT TTCTGCAGCA GCTTACCGCC CACTACGACT ACTGGGGCTT CAACCCCGAA ACACTTTTTC TGCTGGGCAT GTTCTCGCTG CTGGATGCCA TTCTGGGTAT TCCCATGCAG GAAGTGACAG ACATGCTGCC GCTGACCTCC AGCCTGAAGG AAAGCCTGAC AGGCGACCCC AACAATGAGC ACCGCCCGCT TTTTGACCTT ATGGAGGCGC TGGAAGACGC AGACTGGAAC ACGCTGCACG AAATGGTGCC CAGACTCGGG TTTGAGCCTG ATGTGGTCAG AAGCCTGTAC TCCGAAGCCA TGGACTGGGC TGCATCGTTT TTTGCCGTGC AAAGCGGCCC CACCGCGTAA
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Protein sequence | MSENSRTASH RPVFFSKQPI MDSDRRIWGY ELLGGEIQQG IFTVFPEHEA AATSLGSSAY FRLQEDMDRG KRVMVAFDAE SIILGIPRAL PAKAGVVRVS QEATKTEGVP EELRALKKDG YTIAIDCSHA NRPDKECMLL ADVVCVDFSV KAAVIACSRG DASSTMLARG IRDNDMFEAA RRMGVGLYQG PFFKEPEITE GQGLSSHKVA RIELMAILES PDPDLKGVAE AVKADVSLTF RLISLLNSSA FGFRQKIESV DHAVNLLGWN QTRSWLRAVL VADMAGQSEG SQELALISMQ RARFLQQLTA HYDYWGFNPE TLFLLGMFSL LDAILGIPMQ EVTDMLPLTS SLKESLTGDP NNEHRPLFDL MEALEDADWN TLHEMVPRLG FEPDVVRSLY SEAMDWAASF FAVQSGPTA
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