Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3041 |
Symbol | |
ID | 3758034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 3032194 |
End bp | 3033777 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637783950 |
Product | L-lysine 2,3-aminomutase |
Protein accession | YP_389530 |
Protein GI | 78358081 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1509] Lysine 2,3-aminomutase |
TIGRFAM ID | [TIGR00238] KamA family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATTCCGG CCTGTCACAA GGCCGGAACG CAACTGCCCG CCTGTTTTTC GCATTGCGCG CCTGCGCAAC CGGAACATCA TGTTCCGCCC ATGCTACAGC CACAGGCAAC CTTACTCCAT GATATCAGCA CGATAAGCAA CACATGCCAT AATGGCATGG CAGTTGCTAT CCGCGGCTCA TTGCGCACGC TGTGCACACG GCAGCGCGCG GTAACCACTA CAAGCAGAAT CATGGAGAAA ACGGTGACAC TCAGCACTGC AGAACTTGAA CAGGCACCCG CAGAGCCTCC TTCTCTAACG ACGGCACTTT CCCGCGGCAC GGCACAGGCT CCCTCGGCCC ATGATGCCGC GTCTTTTTCC CGTACCCAGA ACACCGCGTC CGGCTTTGTG CTGAGCGCCC GTTCCGATGC CTTCCGCAGG CGTTTTTACC CCGAAGTCAG CCAGAAGACA TGGTCTGACT GGCACTGGCA GTACGCCAAC CGCATCACCT CGCTCGGCGT GCTGGGCACC ATGCTTGGGC TTTCCGAAGA AGAAGCCGGT GCCGGCACGG GGCTTGCCGC GCTGCCGCTG GCAGTCACCC CTTATTATGC GGCCCAGTTT GACCCGCACA ATCCCGCACA TCCCCTGCGG CGCACCATGG TGCCCACAGT GGAGGAATGG TCGCTGAACC CCGGCGAGTC CGCAGACCCG CTGGGTGAAG ACAGCCACAG CCCGGTGCCC GGTCTTGTGC ACAGATATCC TGACCGTGTG CTCTTTCTTG CCACGGATTC CTGCTCGGCC TACTGCCGTT ACTGCACCCG CTCGCGCCGC GTGGGCAAGC CCTGCGCCGG CAGTGCCTCG CGCAGACGCT GGCCCGCAGC CATCGAATAC ATAGAAAATC ACCCCGAAGT GCGCGATGTG CTCATCTCCG GCGGCGACCC GCTGACCATG ACGGACAGTG CACTCAACCA CCTGCTGTCA CAGTTGCGCC GTATTCCGCA TGTGGAATTC ATCCGCATAG GAACCAAGGC GCCCATCGTC ATGCCGCAGC GCATCACGCC TGCGCTTGTC CGCATGCTGC GCCGGTATCA CCCGCTGTTC ATGAGCATCC ACTGCACGCA CCCCGACGAA CTGACGCCGG AAGCGTCTCA GGCGCTCAAC CGGCTGGCCG ATGGCGGTAT TCCGCTGGGC AGCCAGACAG TGCTGCTCAA GGGCATAAAC GATAACGTGC CCACCATGAC AGCTCTTATG CAGGGTCTGC TCAAAAACCG CGTGCGCCCG TACTACCTGT ATCATTGCGA TCCGGTACAG GGTTCGGCGC ATTTCCGCAC GCCCATATAC AAAGGCGTGG AGATAATCCG CGGCATGCGC GGCTTTACCA CCGGCTATGC CGTGCCCACC TATGTGGTGG ACGCTCCCGG CGGGGGCGGC AAAATTCCGC TGATGCCCGA TTATGTTCAG GGATACGACG GCGAAGAGCT TGTCATGCGC AACTATGAAG GCGGCCTGTA CCGCTCGTAT GACCCCGCGG TGCCCCTTGC CGCACACAAC GTGCACAACG CCGGCCCCGC AGGCTGCGCA GACGGAGACA TGCCGTGCTT GTAG
|
Protein sequence | MIPACHKAGT QLPACFSHCA PAQPEHHVPP MLQPQATLLH DISTISNTCH NGMAVAIRGS LRTLCTRQRA VTTTSRIMEK TVTLSTAELE QAPAEPPSLT TALSRGTAQA PSAHDAASFS RTQNTASGFV LSARSDAFRR RFYPEVSQKT WSDWHWQYAN RITSLGVLGT MLGLSEEEAG AGTGLAALPL AVTPYYAAQF DPHNPAHPLR RTMVPTVEEW SLNPGESADP LGEDSHSPVP GLVHRYPDRV LFLATDSCSA YCRYCTRSRR VGKPCAGSAS RRRWPAAIEY IENHPEVRDV LISGGDPLTM TDSALNHLLS QLRRIPHVEF IRIGTKAPIV MPQRITPALV RMLRRYHPLF MSIHCTHPDE LTPEASQALN RLADGGIPLG SQTVLLKGIN DNVPTMTALM QGLLKNRVRP YYLYHCDPVQ GSAHFRTPIY KGVEIIRGMR GFTTGYAVPT YVVDAPGGGG KIPLMPDYVQ GYDGEELVMR NYEGGLYRSY DPAVPLAAHN VHNAGPAGCA DGDMPCL
|
| |