Gene Dde_3011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3011 
Symbol 
ID3758809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2996206 
End bp2997501 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content57% 
IMG OID637783917 
Productadenylosuccinate lyase 
Protein accessionYP_389500 
Protein GI78358051 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR00928] adenylosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.367246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAAC GGTACACCCG TCCCGAAATG GGGCAGCTCT GGACGCTGGA AAACAGATTC 
CGCGTCTGGC TTGAAGTGGA AATCGCCGTC TGCGAAGCCT GGAACCGCCT GGGCGTGATA
GACGACGAAA CAATGACCAC CATACGGGAA AAAGCAGACT TCGATGTGGA GCGCATCCTT
GAAATCGAAG AACAGACCCG CCATGACGTC ATCGCCTTTC TGACCGCCGT GGAAGAAAAG
GTAGGCCCTG CCGCCCGGTT CATCCATCTG GGCTGCACTT CATCTGACAT CGTGGATACC
GCCAACGGCG TGATGCTGAG CCGTGCGGGC GACATGGTGG TGCAGGGTAT AGAGCGTCTG
CTGGTCACGC TGGAAAAACT GGCCCGTGCC AACAAGGGAC GCCTGTGCAT GGGCAGAACC
CACGGAATTC ACGCCGAACC CACCAGCTTC GGACTGAAAA TGGCAGGCTA CTACGCCGAA
TTCCGCCGGC ATCTGGAACG GGTGAAGGCC GGCGTGGAAA GCGTACGCGT GGGCAAGATT
TCCGGTGCCG TGGGCACCTA CGCCATGCTC AACCCCGAAG TGGAGCGCAT CACCTGCCAG
ATTCTGGGAC TGCACGCAGA CCCCATCTCC ACCCAGATCA TCCAGCGTGA CAGACACGCG
CATTTCTTTA CCGCTCTGGC GGTCTGTGCC GGCGGCATAG AACGCCTGTG CGTTGAACTG
CGCCACCTGC AGCGCACTGA AGTGCTGGAA GCCGAAGAAG GTTTCCGCAA GGGGCAGAAA
GGTTCTTCGG CCATGCCGCA CAAAAAGAAC CCCATCTCGG CGGAAAACAT GACCGGTCTT
GCACGGCTTA TCCGCACCAA CTCCGTTGCC GCCATGGAAA ATCAGGCACT GTGGCACGAA
CGCGATATAT CCCACTCTTC CGTGGAACGC GTCATCATGC CCGATTCGAC CATACTTATG
GATTATGTGC TGCACCGCCT GTGCAATCTG CTCGAAAACC TGCGTGTTAT TCCCGAAAAC
ATGGACCGCA ACCTTATGAG CTCATACGGT CTGTTCTTTT CACAGCGGGT GCTCACCGCT
CTGGTGGAGT CGGGCATGGC ACGGCAGGAA GCCTATGTCA TGGTGCAGAA AGCAGCCATG
AAAAGCTGGG ATACCGGCAC CAGTTTTCCC GAAAATGTCC GGGCCGATGC AGACATAACC
GCACATCTGC AGCCTGAGGT GCTTGATGCG CTGTTCGACG CAGGGTACTA CCTGCGTCAC
GAAGACATGA TCTTTGACCG CGTTTTTGCG GGCTAA
 
Protein sequence
MIERYTRPEM GQLWTLENRF RVWLEVEIAV CEAWNRLGVI DDETMTTIRE KADFDVERIL 
EIEEQTRHDV IAFLTAVEEK VGPAARFIHL GCTSSDIVDT ANGVMLSRAG DMVVQGIERL
LVTLEKLARA NKGRLCMGRT HGIHAEPTSF GLKMAGYYAE FRRHLERVKA GVESVRVGKI
SGAVGTYAML NPEVERITCQ ILGLHADPIS TQIIQRDRHA HFFTALAVCA GGIERLCVEL
RHLQRTEVLE AEEGFRKGQK GSSAMPHKKN PISAENMTGL ARLIRTNSVA AMENQALWHE
RDISHSSVER VIMPDSTILM DYVLHRLCNL LENLRVIPEN MDRNLMSSYG LFFSQRVLTA
LVESGMARQE AYVMVQKAAM KSWDTGTSFP ENVRADADIT AHLQPEVLDA LFDAGYYLRH
EDMIFDRVFA G