Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3011 |
Symbol | |
ID | 3758809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2996206 |
End bp | 2997501 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637783917 |
Product | adenylosuccinate lyase |
Protein accession | YP_389500 |
Protein GI | 78358051 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0015] Adenylosuccinate lyase |
TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.367246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGAAC GGTACACCCG TCCCGAAATG GGGCAGCTCT GGACGCTGGA AAACAGATTC CGCGTCTGGC TTGAAGTGGA AATCGCCGTC TGCGAAGCCT GGAACCGCCT GGGCGTGATA GACGACGAAA CAATGACCAC CATACGGGAA AAAGCAGACT TCGATGTGGA GCGCATCCTT GAAATCGAAG AACAGACCCG CCATGACGTC ATCGCCTTTC TGACCGCCGT GGAAGAAAAG GTAGGCCCTG CCGCCCGGTT CATCCATCTG GGCTGCACTT CATCTGACAT CGTGGATACC GCCAACGGCG TGATGCTGAG CCGTGCGGGC GACATGGTGG TGCAGGGTAT AGAGCGTCTG CTGGTCACGC TGGAAAAACT GGCCCGTGCC AACAAGGGAC GCCTGTGCAT GGGCAGAACC CACGGAATTC ACGCCGAACC CACCAGCTTC GGACTGAAAA TGGCAGGCTA CTACGCCGAA TTCCGCCGGC ATCTGGAACG GGTGAAGGCC GGCGTGGAAA GCGTACGCGT GGGCAAGATT TCCGGTGCCG TGGGCACCTA CGCCATGCTC AACCCCGAAG TGGAGCGCAT CACCTGCCAG ATTCTGGGAC TGCACGCAGA CCCCATCTCC ACCCAGATCA TCCAGCGTGA CAGACACGCG CATTTCTTTA CCGCTCTGGC GGTCTGTGCC GGCGGCATAG AACGCCTGTG CGTTGAACTG CGCCACCTGC AGCGCACTGA AGTGCTGGAA GCCGAAGAAG GTTTCCGCAA GGGGCAGAAA GGTTCTTCGG CCATGCCGCA CAAAAAGAAC CCCATCTCGG CGGAAAACAT GACCGGTCTT GCACGGCTTA TCCGCACCAA CTCCGTTGCC GCCATGGAAA ATCAGGCACT GTGGCACGAA CGCGATATAT CCCACTCTTC CGTGGAACGC GTCATCATGC CCGATTCGAC CATACTTATG GATTATGTGC TGCACCGCCT GTGCAATCTG CTCGAAAACC TGCGTGTTAT TCCCGAAAAC ATGGACCGCA ACCTTATGAG CTCATACGGT CTGTTCTTTT CACAGCGGGT GCTCACCGCT CTGGTGGAGT CGGGCATGGC ACGGCAGGAA GCCTATGTCA TGGTGCAGAA AGCAGCCATG AAAAGCTGGG ATACCGGCAC CAGTTTTCCC GAAAATGTCC GGGCCGATGC AGACATAACC GCACATCTGC AGCCTGAGGT GCTTGATGCG CTGTTCGACG CAGGGTACTA CCTGCGTCAC GAAGACATGA TCTTTGACCG CGTTTTTGCG GGCTAA
|
Protein sequence | MIERYTRPEM GQLWTLENRF RVWLEVEIAV CEAWNRLGVI DDETMTTIRE KADFDVERIL EIEEQTRHDV IAFLTAVEEK VGPAARFIHL GCTSSDIVDT ANGVMLSRAG DMVVQGIERL LVTLEKLARA NKGRLCMGRT HGIHAEPTSF GLKMAGYYAE FRRHLERVKA GVESVRVGKI SGAVGTYAML NPEVERITCQ ILGLHADPIS TQIIQRDRHA HFFTALAVCA GGIERLCVEL RHLQRTEVLE AEEGFRKGQK GSSAMPHKKN PISAENMTGL ARLIRTNSVA AMENQALWHE RDISHSSVER VIMPDSTILM DYVLHRLCNL LENLRVIPEN MDRNLMSSYG LFFSQRVLTA LVESGMARQE AYVMVQKAAM KSWDTGTSFP ENVRADADIT AHLQPEVLDA LFDAGYYLRH EDMIFDRVFA G
|
| |