Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3004 |
Symbol | |
ID | 3758802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2990103 |
End bp | 2990864 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637783910 |
Product | phosphoglycerate mutase |
Protein accession | YP_389493 |
Protein GI | 78358044 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0588] Phosphoglycerate mutase 1 |
TIGRFAM ID | [TIGR01258] phosphoglycerate mutase, BPG-dependent, family 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0298836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTACAAGC TGGTACTTGT CCGCCACGGA CAAAGCACAT GGAATCTGGA AAACCGGTTC ACCGGCTGGA CCGATGTGGA TCTGACCCCG CTGGGCGAAA CCGAAGCCCG CGAAGGCGCA CGTCTGATAG CCGCAGCGGG CCTTACCTTT GACGAATGCC ATACCTCGGT GCTCAAGCGG GCCATACGCA CCCTGAACAT CATACAGGAA GAGCTGGACC TGCTGTGGCT GCCTGTGCAC CGCCACTGGC GGCTCAACGA GCGCCACTAC GGCGCGCTGC AGGGACTGAA TAAAAAAGAA ATGTCGGAAA AATACGGCGA GGAACAGGTA TTCATCTGGC GGCGCAGCTT TGACACACCG CCCCCTGCCC TTACCGCCGA CGACCCGCGC CACCCCGCGC ATGACCGGCG GTACGCCTCG CTGACAGCCC GTCAGATGCC GCTGTGCGAA AGCCTTAAAG ACACCGTGGC CAGAGTGCTG CCATACTGGC ACGAAACCCT TGCTCCGGCC ATACAGGCCG GCCGCCGCCT GCTGGTGGCC GCACACGGCA ACAGTCTGCG GGCGCTCGTC ATGCACCTTG ACGGCATGTC GCCAGACGAA GTCACGGGGC TGAACATTCC CACCGGGCTG CCGCTGGTGT ACGAACTGGA CAGTAATCTT ACACCGCTGC GGCGCGCGTA TCTGGGTGAT GCCGAAGCCG CCGAGGCAAA AGCCAGAGCC GTTGCCGAAC AGGCAAAGGC TGGAACAACG GAACGCCCGT GA
|
Protein sequence | MYKLVLVRHG QSTWNLENRF TGWTDVDLTP LGETEAREGA RLIAAAGLTF DECHTSVLKR AIRTLNIIQE ELDLLWLPVH RHWRLNERHY GALQGLNKKE MSEKYGEEQV FIWRRSFDTP PPALTADDPR HPAHDRRYAS LTARQMPLCE SLKDTVARVL PYWHETLAPA IQAGRRLLVA AHGNSLRALV MHLDGMSPDE VTGLNIPTGL PLVYELDSNL TPLRRAYLGD AEAAEAKARA VAEQAKAGTT ERP
|
| |