Gene Dde_3004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3004 
Symbol 
ID3758802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2990103 
End bp2990864 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content62% 
IMG OID637783910 
Productphosphoglycerate mutase 
Protein accessionYP_389493 
Protein GI78358044 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0588] Phosphoglycerate mutase 1 
TIGRFAM ID[TIGR01258] phosphoglycerate mutase, BPG-dependent, family 1 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0298836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAAGC TGGTACTTGT CCGCCACGGA CAAAGCACAT GGAATCTGGA AAACCGGTTC 
ACCGGCTGGA CCGATGTGGA TCTGACCCCG CTGGGCGAAA CCGAAGCCCG CGAAGGCGCA
CGTCTGATAG CCGCAGCGGG CCTTACCTTT GACGAATGCC ATACCTCGGT GCTCAAGCGG
GCCATACGCA CCCTGAACAT CATACAGGAA GAGCTGGACC TGCTGTGGCT GCCTGTGCAC
CGCCACTGGC GGCTCAACGA GCGCCACTAC GGCGCGCTGC AGGGACTGAA TAAAAAAGAA
ATGTCGGAAA AATACGGCGA GGAACAGGTA TTCATCTGGC GGCGCAGCTT TGACACACCG
CCCCCTGCCC TTACCGCCGA CGACCCGCGC CACCCCGCGC ATGACCGGCG GTACGCCTCG
CTGACAGCCC GTCAGATGCC GCTGTGCGAA AGCCTTAAAG ACACCGTGGC CAGAGTGCTG
CCATACTGGC ACGAAACCCT TGCTCCGGCC ATACAGGCCG GCCGCCGCCT GCTGGTGGCC
GCACACGGCA ACAGTCTGCG GGCGCTCGTC ATGCACCTTG ACGGCATGTC GCCAGACGAA
GTCACGGGGC TGAACATTCC CACCGGGCTG CCGCTGGTGT ACGAACTGGA CAGTAATCTT
ACACCGCTGC GGCGCGCGTA TCTGGGTGAT GCCGAAGCCG CCGAGGCAAA AGCCAGAGCC
GTTGCCGAAC AGGCAAAGGC TGGAACAACG GAACGCCCGT GA
 
Protein sequence
MYKLVLVRHG QSTWNLENRF TGWTDVDLTP LGETEAREGA RLIAAAGLTF DECHTSVLKR 
AIRTLNIIQE ELDLLWLPVH RHWRLNERHY GALQGLNKKE MSEKYGEEQV FIWRRSFDTP
PPALTADDPR HPAHDRRYAS LTARQMPLCE SLKDTVARVL PYWHETLAPA IQAGRRLLVA
AHGNSLRALV MHLDGMSPDE VTGLNIPTGL PLVYELDSNL TPLRRAYLGD AEAAEAKARA
VAEQAKAGTT ERP