| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3000 |
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| Symbol | |
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| ID | 3758798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2984054 |
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| End bp | 2986255 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637783906 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_389489 |
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| Protein GI | 78358040 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACG AACAGAGCAC CATACGGGTA AGCGTGGCGG ACACGCGTGA ACGCAAACGC
CGCCAGCGTG AACTCCTTCT TGCCGCCGTG GCTTTTCTTG CCGTCATTAT CCTCACCTGG
GTTGAACTGA CGTACCTCGG CGTTGATTCC TACTTTTTCC TCGCGCTTTT CAATCTCAAC
TTCATTCTGC TGCTGCTGGT GCTGTTCATA GTGGTGCGCA ACGGCGTCAA GCTGATACTG
GAACGCCGCC GCAGAGTGCT GGGGTCGCGG CTGCGCACAC GGCTGGTGCT GGCCTTCATG
TCGCTTTCTC TTTTTCCCAC CGTGCTCATG TTTGTGGTCA GTGCGCGCTT TGTGCAGACG
TCCGTGGACT ACTGGTTCAA AAGTCAGGTG GAAACGTCCA TGGAAATGGC GCTGGACGTG
GGGCAGACAC TATACAGCAC AACCCGTGAC AGGCTGAACC AGCGCGGCGA TTTCATCGTA
AAGGAAATCA TCGAACGCCG GTTTGCCTGG GGCGGAAAAA GCATGGATGC CTATCTCCAG
AAAAAACAGC AGGAGTACAA TCTGCTGCTG GTGGGTGTGC TGCGCACCGA CAGAAGCGAG
CAGAACTGGC ACGGCGATGC CAGCGCAGCC GCACTGTGGG CCGAAACCAA AGCCCGCATA
GACTGGGACA GTCTGGAAGC GCAGCCCCGT TACTGGTCAC TGCTGTGGCC CGGGCAGGAG
GCGGACTATG CCGTGGGAGT GCTGCCGGTG GACGACGGCA GAACAGGGTA TCTGGTGCTG
GTCGAAAACA TCGGTCAGGG CCTCATGTAC AAGCTCGACA GAGTGGTGCG CGGTTTTGAC
GAATACAAAA AACTCAAGAC GCTGAAACAT CCGCTCAAAG TCACACTGTA TTTCATTCTC
GGGGTGCTTA CCCTGCTGAT CATTCTCGGG GCCATGTGGT TCGGGTTCAG GCTGTCAAAG
GAACTGACGG CCCCCATCAT GGCGCTGGCG GAAGGCACGG AGCGCATTGC CCGCGGCGAC
CTGACTGTAC GGCTGGAAGA CAGCTCGACA GATGAACTGG GTGTGCTGGT GCAGTCGTTC
AACCGCATGA CGGAAGACCT GGAAATGAGC CGCAGCCGCC TGACGGATGC CAACCTGATG
CTGGCGGCGC AGAACGAAGA AAAAGAACAG CGCACACGGT ACATCGAGGC CGTACTGGAC
AACATCGCCG CCGGCGTGGT TTCGCTGGAC GCCGAAGGCC GCATCAGCAC CATGAACAAA
GCGGCGGGAG CCATGTTTTC CATCGATCCG CGCCCGCTTC TCGGCTCGCG CCCGGGGGAC
CTGCTTTCCG GAGAACACTC CCGCATGTTC CGCGAAATGG TGCGGCAGTT CAAGGCTTCT
CCCGAATCGC AGTGGCAGCG CCAGATGACG CTGCGCGCAG GCGACTATGA ATGGAAGCTG
CTGGTGAACG CTGTGGGGCT GCCCACGCCG CAGGGCGACT ACAACGGGCT GGTGGCCGTG
TTTGAAGACA TCACCGAACT GGAAAAAATG CAGCGCATGG CGGCATGGCG CGAAGTGGCG
CGGCGCATAG CCCACGAGAT CAAAAATCCG CTCACCCCCA TCAAGCTTTC GGCTCAGCGG
CTGCAGCGCA AGTTCGGACC GGACATTGAA GACCCTATTT TTCCGCAGTG CACAGAACTC
ATCGTGCGGC AGGTGGAGCA GTTGCAGCAG ATGGTGCAGG AATTTTCGGC CTTTGCCAAA
CTGCCCGAGG TCAAACCTCT GCCCGGCGAC ATCATGCCGC TGCTCAGCGA GCTGGTGACC
ATGTTCCGCA CCAGCCACAG CGGCATAACG TGGGAAATGC ACGCCCCGCA ATCGCTGCCG
CGCATGAATC TGGATAAAAA AGCCATGCAC CGGGCGCTGC TTAACATCAT GACCAACGCG
GCCGAAGTGC TGGAGGGCCG CGAGTCGCCC GCAGTCACCG TAACCGTGCG GCATGACAAG
GCGCTGGGCC TTGTGCGGGT GGACGTGGCC GACAACGGTC CCGGTCTGAG CGCGGAAGAA
CGCTCGCGCC TGTTTGAACC CTACTTTTCC CGCAAGCGCG GTGGTACCGG ACTGGGGCTG
ACCATCGTCA AATCCATAGT ACAGGACCAC AGAGGCTATG TGCGTGCAAA TGCCGCCCCC
GACGGCGGAA CCATTGTCAC AATGGAGCTG CCTGTGACAT AA
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| Protein sequence | MTDEQSTIRV SVADTRERKR RQRELLLAAV AFLAVIILTW VELTYLGVDS YFFLALFNLN
FILLLLVLFI VVRNGVKLIL ERRRRVLGSR LRTRLVLAFM SLSLFPTVLM FVVSARFVQT
SVDYWFKSQV ETSMEMALDV GQTLYSTTRD RLNQRGDFIV KEIIERRFAW GGKSMDAYLQ
KKQQEYNLLL VGVLRTDRSE QNWHGDASAA ALWAETKARI DWDSLEAQPR YWSLLWPGQE
ADYAVGVLPV DDGRTGYLVL VENIGQGLMY KLDRVVRGFD EYKKLKTLKH PLKVTLYFIL
GVLTLLIILG AMWFGFRLSK ELTAPIMALA EGTERIARGD LTVRLEDSST DELGVLVQSF
NRMTEDLEMS RSRLTDANLM LAAQNEEKEQ RTRYIEAVLD NIAAGVVSLD AEGRISTMNK
AAGAMFSIDP RPLLGSRPGD LLSGEHSRMF REMVRQFKAS PESQWQRQMT LRAGDYEWKL
LVNAVGLPTP QGDYNGLVAV FEDITELEKM QRMAAWREVA RRIAHEIKNP LTPIKLSAQR
LQRKFGPDIE DPIFPQCTEL IVRQVEQLQQ MVQEFSAFAK LPEVKPLPGD IMPLLSELVT
MFRTSHSGIT WEMHAPQSLP RMNLDKKAMH RALLNIMTNA AEVLEGRESP AVTVTVRHDK
ALGLVRVDVA DNGPGLSAEE RSRLFEPYFS RKRGGTGLGL TIVKSIVQDH RGYVRANAAP
DGGTIVTMEL PVT
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