Gene Dde_2978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2978 
Symbol 
ID3757983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp2959862 
End bp2960434 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content61% 
IMG OID637783879 
Producthypothetical protein 
Protein accessionYP_389467 
Protein GI78358018 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0770545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACAC CGGCACTGCT TGCACTGGCT GTGGCGCTGG CCATGGATGC ACTGGCGGTG 
GCTGTGGCCA CCGGATGCAG ACTACGCACG GTATCGGCCC GTCAGACGCT TCGTCTGGCA 
TGGCACTTCG GCCTTTTTCA GGCTGCCATG CCCATTGCGG GGTGGTTTAT GGGACAGGGC 
ATACGAAGCT TTGTGGATGC CTGGGCGCAC TGGATAGCCT TCGGCCTGCT GGCGTTCATC 
GGGCTGAAAA TGCTCAAGGA AGCCTTTGAA CACGACGACG CGGAATGCGG CATGGCCGAC 
CCCACCAGAG GAACGTCGCT CATCATGCTT TCCGTGGCCA CCAGCATAGA CGCGCTGGCC 
GTGGGCGTAA CACTTTCCAT GCTGGGGCTG TCCATATGGA TGCCCGCCGC GGTCATCGGG 
CTTGTCTGTC TGGGGCTGAC CGCCGCAGGT GTGCAGCTGG GCAGAGTACT GGCCGCGTCA 
TCAGCGCTTT CGCGGTATGC GGAAATACTG GGCGGCGCAG TGCTGCTGGG TATTGGTTTT 
AAAATTCTGC ACGAAAGCGG CGTGTTCGGC TGA
 
Protein sequence
METPALLALA VALAMDALAV AVATGCRLRT VSARQTLRLA WHFGLFQAAM PIAGWFMGQG 
IRSFVDAWAH WIAFGLLAFI GLKMLKEAFE HDDAECGMAD PTRGTSLIML SVATSIDALA 
VGVTLSMLGL SIWMPAAVIG LVCLGLTAAG VQLGRVLAAS SALSRYAEIL GGAVLLGIGF 
KILHESGVFG