Gene Dde_2868 details

Gene Information

• Locus tag: Dde_2868
• ID: 3758829
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. G20
• Kingdom: Bacteria
• Replicon accession: NC_007519
• Strand: +
• Start bp: 2854571
• End bp: 2856598
• Gene Length: 2028 bp
• Protein Length: 675 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637783769
• Product: type I restriction-modification system DNA methylase
• Protein accession: YP_389358
• Protein GI: 78357909
• COG category: [V] Defense mechanisms
• COG ID: [COG0286] Type I restriction-modification system methyltransferase subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0465984
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGAAT TTACGGGATC GGCAGCTTCA CAGGCTGACT TTATTTGGAA GAACGCGGAA 
GACCTGTGGG GGGACTTCAA ACATACGGAC TTTGGCAAGA TCATCTTGCC GTTTACCTTG 
CTGCGCCGCC TGGAGTGTGC GTTGGAGCCA ACCCGCGAAG CGGTGAGAGA GGCATACGCC 
ACTTTCAAGG ATGCCGATGT TGAGCTGGAC ACCATTCTGC GCTCTACCGC TGAATACCCC 
TTCTTCAACA CCTCAGAATA CTCCCTTGGC ACCCTGGGTA GCACCAAGAC GCGCCGCAAC 
CTAGAAGACT ACATCGCCCT GTTTTCAGAT AACGCCCGCG CTATCTTCGA GGAGTTCGAT 
TTCGGCAATA CCGTGATCCG GCTGGAGAAG GCTGGCTTGC TGTACAAGAT TTGCCAGAAC 
TTTGCCAAGA TCGACCTGCA CCCTGAGGTG GTGCCGGATC GGGTGATGAG CAACATCTAC 
GAACACCTGA TTCGCCGCTT TGGTGCCGAG GTCAATGAAG GGGCCGAGGA CTTCATGACG 
CCGCGTGACA TCGTTCACCT GGCGACCGCG CTTTTGCTTG ACCCGGATGA CGCCCTGTTT 
GAGGCCAGCC CCGGTTTGAT TCGTACCCTG TATGACCCGA CCTGCGGCAC GGGTGGGTTC 
CTCACTGATG CCATGAACCA TGTGGGTGAT TACGGTGGCC GCGACAAGGT ACCGCCGGTT 
CTGGTGCCGC ACGGGCAGGA GCTGGAACCG GAAACCCATG CGGTTTGTGT GGCCGGTATG 
CTGATCCGCC GTCTGGAATC CGACCCTGGC CGCGATCTGT CGAAGAACAT TCGTCAGGGC 
AGTACGCTGT CCAACGACCA GTTTGCCGGT GAGCGTTTCC ACTACTGCCT GTCCAATCCG 
CCTTTTGGCA AGAAATGGGA GAAGGACAAA AACGCCGTCG AAGCGGAACA CAAAAAAGGC 
GAATTGGGCC GCTTTGGGCC GGGCCTGCCG AAAATCAGCG ATGGCTCCAT GCTGTTTTTG 
ATGCATCTTG CCAGCAAGCT GGAACTGCCG ATCAACGGCG GTGGCCGCGC CGCTATCGTG 
CTGTCCGGTT CGCCACTATT CAACGGTGGT GCCGCGTCTG GCGAATCGGA AATCCGCCGC 
TGGTTGCTGG AAAACGACCT GATTGAAGCC ATTGTGGCCC TGCCAACGGA TCTGTTCTTC 
CGCACCAATA TCGCCACCTA CCTGTGGATT CTATCGAACA AGAAGCCGCA GGAGCGCAAA 
GGCAAGGTGC AGTTGATCAA CGCCACCGAC CTGTGGACTT CAATTCGCAA CGAGGGCAAC 
AAGCGCCGTA TTGTCAGCGA TGATCAGCGC CGCCAGATTT TGGACATCTA CGCCGCTGGG 
GAAACCGATG CGCTTTCCCG GATGCTCGAC TACCGCACCT TTGGCTACCG CCGTATCAAG 
GTACTGCGCC CGCTGCGCAT GATCCTAGAA TTGGATAAGG CGGGCATGGA GCGGCTGGAA 
GCCGACCCCG CTTGGGAAAA GCTCCCTGAC GCGCATCAGG CATTCTGGCG CAACGCTCTC 
AAGCCGCTGA TCGGGCAAAC GCAGACCTAT GGTTGGGCAG AAACCTTTGC CAAGGACACA 
ATCAAGTCCG ACGAAGCCAA GCAGCTCAAG GTCAAGGCCA ACAAGACGTT TATCGCCGCG 
CTGATCAACG CCTTTGGTCA CAAAGACCCG GAAGCCGAGC CCGTCACAGA TGCCAACGGC 
AACCTGGTGC CGGATACTGA CCTGACCGAT TACGAAAATG TTCCCTACAT GGAAGACATT 
GACGACTACT TCGCCCGTGA AGTGCTGCCC CATGTCCCGG ATGCCTATCT GGACGAGAGC 
TTTACCGATG CGAAGGATGG CAAGCTGGGC CGCGTCGGCT ATGAGATCAA CTTCAACCGC 
TTCTTCTATC AGTACCAGCC GCCGCGCAAG CTGCATGATA TTGATGAAGA CCTGAAGCAG 
GTGGAAGCCG AGATTGCCGC GCTACTGGCA GAGGTGGCCA GCAAATGA 

 

Protein sequence

MNEFTGSAAS QADFIWKNAE DLWGDFKHTD FGKIILPFTL LRRLECALEP TREAVREAYA 
TFKDADVELD TILRSTAEYP FFNTSEYSLG TLGSTKTRRN LEDYIALFSD NARAIFEEFD 
FGNTVIRLEK AGLLYKICQN FAKIDLHPEV VPDRVMSNIY EHLIRRFGAE VNEGAEDFMT 
PRDIVHLATA LLLDPDDALF EASPGLIRTL YDPTCGTGGF LTDAMNHVGD YGGRDKVPPV 
LVPHGQELEP ETHAVCVAGM LIRRLESDPG RDLSKNIRQG STLSNDQFAG ERFHYCLSNP 
PFGKKWEKDK NAVEAEHKKG ELGRFGPGLP KISDGSMLFL MHLASKLELP INGGGRAAIV 
LSGSPLFNGG AASGESEIRR WLLENDLIEA IVALPTDLFF RTNIATYLWI LSNKKPQERK 
GKVQLINATD LWTSIRNEGN KRRIVSDDQR RQILDIYAAG ETDALSRMLD YRTFGYRRIK 
VLRPLRMILE LDKAGMERLE ADPAWEKLPD AHQAFWRNAL KPLIGQTQTY GWAETFAKDT 
IKSDEAKQLK VKANKTFIAA LINAFGHKDP EAEPVTDANG NLVPDTDLTD YENVPYMEDI 
DDYFAREVLP HVPDAYLDES FTDAKDGKLG RVGYEINFNR FFYQYQPPRK LHDIDEDLKQ 
VEAEIAALLA EVASK