| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2837 |
|---|
| Symbol | |
|---|
| ID | 3757860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 2823488 |
|---|
| End bp | 2824999 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637783738 |
|---|
| Product | uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase |
|---|
| Protein accession | YP_389327 |
|---|
| Protein GI | 78357878 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1587] Uroporphyrinogen-III synthase |
|---|
| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.452302 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTT ACCTGATCGG TGCCGGTCCC GGCGACCCCG GACTGCTGAC CATCAAGGGC
CGTGATATTT TGAAGCGCGC CGATGTCATT GTGTACGACT ATCTGGCCAA CGACGCTTTT
CTGAATTACG CGGCCCCCGG CGCGGAAATC ATCTATGTGG GCAAAAAAGG CGGCGACCAT
ACCCTGTCTC AGGAAGGCAT CAACAGGTTG ATTGTTGAGA AGGCCAGAGA AGGCAAGGTG
GTGGCGCGTC TCAAGGGCGG CGATCCCTAT GTGTTCGGAC GGGGTGGCGA AGAAGCGGAA
GAACTGCTTG ACGCCGGCGT GAACTTCGAG GTTGTGCCGG GAGTCACTTC GGCTGTGGCA
GGCCCCGCAT ACGCCGGTAT TCCGCTGACG CACCGCAGCT ATTCCTCCTC CGTTTCATTC
ATAACCGGCC ACGAAGATCC TTCTAAGCCC GAATCGGCTC ATAACTGGAA GGCGCTGGCC
GCCAGTGCCA GCACGCTGGT GTTCTTTATG GGCATGAAAA ATCTGCCCGA AATTTCGCGC
AAGCTCATTG AGGCCGGCAT GGACCCCGAT ACGCCTGCGG CACTTGTGCG CTGGGGTACC
ACATCGCGCC ACCGCAGTCT GGCAGCCACC ATTGCCACCC TGCCGGAAGA AGGCAAAAAA
GCGGGATTTT CTTCTCCCAG CCTTATTGTT GTGGGGCATG TGGTCAAACT GCGCGACCGG
CTGAACTGGT TTGAGCAGCT GCCGCTGCTG GGCAGGGGCA TTGTGGTTAC CCGCGCCCGC
GAACAGGCCA GCGGACTGGC AGCCAGCCTG ACGCAGCTGG GAGCGGAGGT CATTCAGTTT
CCCACCATTC TCATCCGCCC GCTGGAAGAT TATGCTCCCG TGCATGACGC CATTCGCAGG
CTTGCCGAAT ATGACTGGCT TGTTTTCACT TCTGTGAACG GCGTGAAACA TTTCTGGCAG
CAAATGGGCC TGCTGGGGCT GGACAGCAGA GCGCTGGGCG GTGTGAAAGT GGCTGCCATC
GGACCGGCAA CGGCGGACGT GCTGCGTGAA AAAGGGATAG AGCCTGATTT TATTCCTGAA
AAATATGTGG CCGAAGGCGT GGTCAAGGGA ATGATAGAGC GCGGAATGGA CGGCAGCAGG
GTGCTGCTGC CCCGTGCGCG TGTGGCTCGC GAAGTGCTGC CGGAAGAGCT TGCCCGTGCC
GGTGCGCGTG TGGATGTGCT GCCGGTATAC GAAACCGTGC CGGGCGACGC CAACCGCAGT
CACGTGCTTG AAATGCTGGA AGAGGGCCGC ATTGACTGCA TCACCTTCGG CAGTTCTTCC
ACTGTGGACA ATTTCTTTTC ACTGGTTGAA CCGGAAGCCA TGCGCCGGTA CGAACATGTG
CATATGGCCT GCATAGGACC GGTAACCCGT AAGACTCTGG AACGCTACGG TTTCACCTGT
TCCATCCAGC CGGAAGATTA TACCATTCCG GCACTGGTGG ATGAACTGGT GCGTCAGCTT
GGCGCGCAGT AG
|
|---|
| Protein sequence | MKVYLIGAGP GDPGLLTIKG RDILKRADVI VYDYLANDAF LNYAAPGAEI IYVGKKGGDH
TLSQEGINRL IVEKAREGKV VARLKGGDPY VFGRGGEEAE ELLDAGVNFE VVPGVTSAVA
GPAYAGIPLT HRSYSSSVSF ITGHEDPSKP ESAHNWKALA ASASTLVFFM GMKNLPEISR
KLIEAGMDPD TPAALVRWGT TSRHRSLAAT IATLPEEGKK AGFSSPSLIV VGHVVKLRDR
LNWFEQLPLL GRGIVVTRAR EQASGLAASL TQLGAEVIQF PTILIRPLED YAPVHDAIRR
LAEYDWLVFT SVNGVKHFWQ QMGLLGLDSR ALGGVKVAAI GPATADVLRE KGIEPDFIPE
KYVAEGVVKG MIERGMDGSR VLLPRARVAR EVLPEELARA GARVDVLPVY ETVPGDANRS
HVLEMLEEGR IDCITFGSSS TVDNFFSLVE PEAMRRYEHV HMACIGPVTR KTLERYGFTC
SIQPEDYTIP ALVDELVRQL GAQ
|
|---|
| |