| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2825 |
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| Symbol | |
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| ID | 3757848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2810167 |
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| End bp | 2811936 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637783726 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_389315 |
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| Protein GI | 78357866 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.208492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTTTA TTCTGGTGGT TGATGATGAA GAATCCATCT GTTTCACGTT CCGCCTGTTT
CTGGAACAGG CGGGATATGA CGTGCAGACG GCCTCGTCCT GCGCGGGGGC GCTGACGGTT
ATTGACGGGC AGACACCCGA CCTGATTTTT GCCGACATCA TGCTGGGCGG ACCCAGCGGC
ATAGACCTGC TGCGCGAAGT GCGCCACCGC GGGCTGACAA TGCCCTTTAT TCTCATAACC
GGTGAACCCA GCATGGAAAC CGCGGTGGAG GCTCTGGCTC TGGGGGCGGA CGAGTATCTG
TACAAACCGG TGGATAAAGA CAAGCTGCTG CTGGCTGCGG AGCGCTGGCT GCGCTACAAG
TACGTGGTGG ATCAGAAACA GCGGCTGGAA CGGGAAAAAG ACGAACTGCG CAGACATCTG
GAAACGGTGT TCAATGCCGT GCCGGATGCC ATTGTGACAG TCTCTTCGGG CTTTACGGTG
CTCAGTGTCA ATGAAGCCTG CCGGAACATA CTGGGCATGG ATACGGCAGC CGCAGGCGGA
CAGCCGTGTG ACAAGGCGCT GGGAAGCGCT GCGGCGGAAT GCATGCCGCT GCTGCGGGAG
GCCGTGCGCG CGGGGCACAT TGTTCAGCGC GGCGGTGTGG CTGTTCAGCA TGACCGTGGC
GAGATAATTG TTGATATAAG TGCCGTGCCG CTGGCCTGTG CAGCGACCGC TACTGAGCAC
TCTCCCGGGA CCGATGCTTC CGGCGGAGTC ATGCTTATAG TGCGTGATGT CACCAGACTG
ACCGGTCTTG AGCGTGCTCT GGCGGCGCAG CATATCCGGC GCAGCATGAT CGGGCGCAGC
AGCGTGATGC GCGGAGTCTT CCGTCTGGTG GAAAGTCTGG CCGACACGGA CACCACCGTG
CTTGTCACCG GTGAAAGCGG AACAGGTAAG GAACTGGTGG CCGATGCGCT GCACCATTCC
GGTGCGCGGG CGCAGGGACC GTTTGTCAAA GTCAACTGTT CGGCTTTATC CGAAACGCTG
CTTGAAAGTG AACTGTTCGG CCACGTGCGC GGGGCGTTCA CCGGTGCCAC AAAGGACAGA
ACCGGCCGCA TACAGATGGC TCACGGAGGA ACTCTTTTTC TGGATGAAAT AGGGGATATT
TCACCCTCGG TGCAGCTTAA ACTGCTTCGG GTGCTGCAGG AAAAAGAAAT TGAGAGGGTG
GGTGAAGGGC GCCCCGTGAA AGTGGACGTA CGCGTGGTGG CCGCAACCAA TAAAAGCCTG
CGTGCACTCG TGGCCCGCGG CAAGTTCCGC GAAGATTTGT ATTACCGGCT GAAAGTGGTC
GAGGTGCACC TGCCCGCACT GCGCGAACGG CGCGAAGACA TTCCGCTGCT GGCAGAACAT
TTTATTGAGG AATTCAACGA GCATTTTCAC CGGCGTGTGA GCGGGCTGGA CAGCAGCGCG
CAACAGCTGC TGGTGCAGTA TGACTGGCCG GGCAATGTCC GTGAACTGCG GCACGCGGTG
GAACATGCGT TCATCATGGC CGGCGGCAAT GTCATTCCCG CTGCGGCATT GCCTGCAGAG
CTCATGCAAA GCGGCCGTTT TTCGGCACAG AGCGCCGGTA CGGGCGCCTT GCGTCATGAT
GCTCCCGATG CCGCCGCGCA GGGGGCGGAG TGGAAACAGC GTCTTTCGGC AGCGCTTAAG
GAAACAGGCG GCAACAAAGC CAAGGCCGCC CGTCTGCTGG GTATTTCGCG CCAGACCATG
TACCGCAGAC TGCGCGAACT GGGTATGTGA
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| Protein sequence | MAFILVVDDE ESICFTFRLF LEQAGYDVQT ASSCAGALTV IDGQTPDLIF ADIMLGGPSG
IDLLREVRHR GLTMPFILIT GEPSMETAVE ALALGADEYL YKPVDKDKLL LAAERWLRYK
YVVDQKQRLE REKDELRRHL ETVFNAVPDA IVTVSSGFTV LSVNEACRNI LGMDTAAAGG
QPCDKALGSA AAECMPLLRE AVRAGHIVQR GGVAVQHDRG EIIVDISAVP LACAATATEH
SPGTDASGGV MLIVRDVTRL TGLERALAAQ HIRRSMIGRS SVMRGVFRLV ESLADTDTTV
LVTGESGTGK ELVADALHHS GARAQGPFVK VNCSALSETL LESELFGHVR GAFTGATKDR
TGRIQMAHGG TLFLDEIGDI SPSVQLKLLR VLQEKEIERV GEGRPVKVDV RVVAATNKSL
RALVARGKFR EDLYYRLKVV EVHLPALRER REDIPLLAEH FIEEFNEHFH RRVSGLDSSA
QQLLVQYDWP GNVRELRHAV EHAFIMAGGN VIPAAALPAE LMQSGRFSAQ SAGTGALRHD
APDAAAQGAE WKQRLSAALK ETGGNKAKAA RLLGISRQTM YRRLRELGM
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