Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2718 |
Symbol | |
ID | 3757741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2720483 |
End bp | 2721193 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637783620 |
Product | orotidine-5'-phosphate decarboxylase |
Protein accession | YP_389209 |
Protein GI | 78357760 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0305405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGATGC CGGAACTTGT GGTTGCTCTT GATTATCCTG AAAGCGAACA GGCTGTTGCC ATGGCTGCAC GGCTGCAAGG AAGCTGCCCC TGGGTCAAGG TGGGGCTTGA ACTGTACACG GCCGCCGGGC CGGACATCCT GCGCCGTCTC AAAGACATGG GGTTTTCTGT TTTTCTCGAT CTGAAGTTTT TCGACATTCC CAATACCGTC CGCGGTGCGG TGCGTTCATC GGTCTGCGCC GGTGCGGACA TGGTCAACAT TCATCTGCTG GGGGGCGCCC GTATGGCGCA GGCCGCCGTG CAGGGGCTGC AGGAAGGCTG TGAATGCAAG GGGCTTGCTG CGCCGCCGGT GCTGCTGGGC GTGACAGTGC TTACCAGTAT GGCCCAGCAG GATCTGCCTG CCGGTCTTGA CCTGCCGCTG GACAGCGTGG TGGATGTGCT GGCGCGCTCC GGCAGAGAGT GGGGCTTGAA CGGTGTCGTG TGTTCGGGGT ATGAAGTTGA AAGCATCAAA AAAAGCTGTG GTACAGACTA CATCTGTCTT ACTCCGGGCA TCCGGCCCGC CGCGGCGGAT GACGACCAGC GCAGAACCAT GACCCCGCAG CAGGCTGCGC GGGCCGGTTC CGACTATCTG GTTGTGGGCA GACCCGTTAC CGGAGCCGCT GACCCGGCCG GGGCCGCGTA CAGCATCATG GAATCTGTCC GGCAGGCGTA G
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Protein sequence | MMMPELVVAL DYPESEQAVA MAARLQGSCP WVKVGLELYT AAGPDILRRL KDMGFSVFLD LKFFDIPNTV RGAVRSSVCA GADMVNIHLL GGARMAQAAV QGLQEGCECK GLAAPPVLLG VTVLTSMAQQ DLPAGLDLPL DSVVDVLARS GREWGLNGVV CSGYEVESIK KSCGTDYICL TPGIRPAAAD DDQRRTMTPQ QAARAGSDYL VVGRPVTGAA DPAGAAYSIM ESVRQA
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