Gene Dde_2605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2605 
Symbol 
ID3757627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2624869 
End bp2626107 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content56% 
IMG OID637783506 
Producthypothetical protein 
Protein accessionYP_389096 
Protein GI78357647 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000329131 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAGCA TCCGCAAGAG CCTTTTGCAG TTTGTATTTG CAGGCTCTTA CATGAAACGC 
TGGAATGACA AACTGCGCCC TGTGGAACTG CTGGAAGTGG ACAAACAGGC GCACAAGATG
ATCGTGGCGT GGCTGCTTTA CCAGCAGAAT TCGGATGACC TTGACGATAC AAGCCGTCTG
CGTCTGGGCA GCGACATTAT CGAAGGCGGC ATTTTTGACT ATTTTTACCG TCTTGTCATC
ACAGACATCA AGCCGCCCGT ATTTTACCGC ATCAAGGACA ATGCCCAGCA TTATGCCCAG
CTTTCGGCCT GGGTGCTGGA TGAACTGGAA CCGCTGGTGC AGCCACTGGG CGAAGATTTC
TGGGGGCGTA TGCGCGGGTG GGTGCAGCGT CCGGAAAAAA ATTCCAGAGC GGACCGTATT
CTTGATGCCG CGCATCTTTT TGCCAGCAAC TGGGAGTTCC GGCTTATTGA GTCGCTGAAC
CGTTTTGACG ACGAAATCGA AGATATCGGG GCTTCGTTCG ATGCCAAGCT GGCGGGGTTT
GATGACCTGA AGGGCATGGA CAGCCTGCGG CATGCCACGG GGGCAGTGGG CCGGTTTGCG
GCGTTGTGCG GCCAGCTGCG TTTTCAGAAA CGCTGGTCGC AGACACCGCG CATCCCCGAA
ACGTCAGTGC TCGGCCATAT GTTTCTGGTG GCATGCTATT CGTATTTTTT CAGCCTTGCC
GTCAACGCAT GCGGCGCGCG CAGGCAGAAT AATTTTTTCA TCGGTCTGTT TCACGACCTG
CCGGAGCTGC TGACCCGCGA CATTATTTCT CCTGTAAAAA AGTCGGTGGA AGAGCTGGAC
GCTGTGATAA AGGAATACGA AGAAGCCGAA CTGCGCCGCA AGGTGCTGAA CCCGCTGGAA
GAAGAGGGCT TCGGGGGCAT TGCCGCGCGT CTGTCGTATT ATCTTGGTCT GGAGGTGGGG
TCGGAGTTTA CAGAGGCGGT TGTGGATAAC GGCAATGTAC TGGCGGTGGA CTTTGAGCTT
TTGCAGAGCA GGTACAACCA CGACCGGTTT GACCCGCGCG ACGGAAGAAT GCTGAAAACC
TGCGATACGC TGGCCGCGTT TATCGAGGCG TATACCGCTG TGCGCAACGG CATCAGTTCT
GATCAGCTGC AGGCGGCTTT GTGGCGGTTG CGTGACAAAA ACCGCCGCAC GGTCATCGGG
CCGGTGCATG TGGGAGCCCT TTTTGCCGAC TTTGACTGA
 
Protein sequence
MVSIRKSLLQ FVFAGSYMKR WNDKLRPVEL LEVDKQAHKM IVAWLLYQQN SDDLDDTSRL 
RLGSDIIEGG IFDYFYRLVI TDIKPPVFYR IKDNAQHYAQ LSAWVLDELE PLVQPLGEDF
WGRMRGWVQR PEKNSRADRI LDAAHLFASN WEFRLIESLN RFDDEIEDIG ASFDAKLAGF
DDLKGMDSLR HATGAVGRFA ALCGQLRFQK RWSQTPRIPE TSVLGHMFLV ACYSYFFSLA
VNACGARRQN NFFIGLFHDL PELLTRDIIS PVKKSVEELD AVIKEYEEAE LRRKVLNPLE
EEGFGGIAAR LSYYLGLEVG SEFTEAVVDN GNVLAVDFEL LQSRYNHDRF DPRDGRMLKT
CDTLAAFIEA YTAVRNGISS DQLQAALWRL RDKNRRTVIG PVHVGALFAD FD