Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2446 |
Symbol | |
ID | 3757462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2467747 |
End bp | 2469966 |
Gene Length | 2220 bp |
Protein Length | 739 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637783342 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_388938 |
Protein GI | 78357489 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.772322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGACA CAGCCCGGGA AATCCTCATC TCCACATACG GATTCCGCGA CTTTCAGGGG CTGCAAAAAG ATATCATAGA ACACACCGCA TCCGGCGGCG ACGCGCTGGT GCTCATGCCC ACAGGCGGCG GCAAGTCACT GTGCTACCAG ATTCCCTCCA TCATGCGGCA GGGCACCGGT ATTGTCATAT CGCCGCTTAT CGCGCTTATG CAGGATCAGG TGGACAGCCT CACGCAGATG GGAGTACGCG CGGCTTTTCT TAACTCCAGC CTGTCTCCTG AAAAACAGCG CGAGGTGGAA GCACGCCTAC TGAGCGGCAT GCTCGATCTC GTCTATGTAG CGCCCGAACG GCTGGTGCAG CCTGCTTTTC TGGGGCTGCT TGAAAGAATA ACACCCGCGC TGTTCGCCAT TGACGAGGCG CATTGCGTTT CGCAGTGGGG GCATGATTTC AGGCCGGAAT ACACACGGCT GACCATTCTG CATGAGCAGT TTCCGCATGT GCCCCGGATA GCTCTTACCG CCACGGCGGA CGGGCCCACC AGACGCGACA TCATCAGGCA TCTGGACCTG CAGGACGCCA CTGTTTTTTC TACGGGATTC GACCGCCCCA ATATTTCGTA CACCATACAG CCCAAAGACA AGCCGCTGGA GCAGCTGCTG CATTTCATCC GCACACGCCA CAAAGGACAG TCGGGCATAG TGTACCGGCT GAGCAGAAAA AAAGTTGAAG AAACAGCAGC CTGGCTGTGT GCAAAAGGCA TAGAAGCCCT GCCCTATCAC GCAGGGCTCA ACGCCATTCA GCGTCATCAC AATCAGGAAC GGTTCATGCG TGAAGACGGG CTGGTCATGG TGGCTACCGT GGCCTTCGGC ATGGGGGTGG ACAAGCCGGA TGTACGCTTT GTGGCACACC TTGAGCCGCC AAAAAGTCTG GAAGCCTATC ATCAGGAAAC CGGACGTGCG GGACGTGACG GCCTGCCCGC CGATGCATGG ATGACATACG GTCTGGCCGA TGTGGTGCAA TTGCGGCGCA TGCTGGGCCA AGGCGAAGAA GACAGCCCGC GGCGCATGGT CGAACTGCGC AAGCTGGATG CCATGCTCGC CTTTTGCGAA ACAACCGAGT GCCGCCGTAA AGTGCTGCTG GGCTATTTCG GCGAACACGA CAGAGAACCC TGCGGAAACT GCGACACCTG TCAGTTTCCT GTAGAGACAT GGGACGGCAC GGTGGCCGCC CAGAAAGCAC TGAGCGCCGT ATACCGCACC GGTCAGCGCT TCGGCGCCGC ACACCTGACA GACATACTTA CCGGCAAGCT GACCGACCGC ATACGCAGCC ACGGGCATAA CGACCTGAAA ACATTCGGCT GCGGCAAAGA ACTGGGTGCA TCGCAATGGA AAGGCGTGTT CAGACAGCTG GCATGTCTGG GGCTGCTTGC CACCGATGCG GACGGGCACG GCGGCCTGCG TCTGACACCG GAAAGCTGGC AGGTACTGCG CGGAGAACGC ATGCTGAGCT TCCGGCGTGA CATTCTGGGC CGCTCCGCCA CACGTGCACT GGCAAAAACA CAGGCCGACG CGGCTCTGCA GAATGCCCTG AACACGGAAG AATCCAGACA GCTGTGGGAT ACCCTGCGCT CGTTACGGGG CAGGCTGGCA CAGGAACGTG ACGTGCCGCC CTACGCCGTT TTTGCGGACA GGGCCCTGCT GGAGATGGTC TGCTTTCGGC CGCGCACGCC GGATGACCTG CAATGCATTC ACGGCGTCGG CAAAGCCAAG CTGTCCATGT TCGGGCAGGA ATTTCTTGAT GCGCTGCTCT CGCACGAAGC CGCCTGGGGC AGGCCGGACG ATCTGCCCGC ACTGCCCGAA CGCAGACCGG CTACTGCCGC AAAAAAGGAA AACGGCCTTA CCGACACCAT ACGCGAAACG CTGCAGCTTT TTAACAAGCT GCAGGACATG CAGGCCGTGG CCGAGGCCCG CGCCCTGAAA CCGGCCACCA TATGCAATCA TCTGGTACGG TGCATACGTC ATGGCGAGCT GACCACGGAA CAGGTGGTGC CCCTGCCCGC GCACGAGCTG GCAGAAATAC GGGGAGTGCT GGGTGAAACA GCTTCGCTGG GCGGAGTTAC CGCCGCGCAC GGCAGACTGA AAGGCCGCTA TGATTTTGAA ACCCTGCGGC TGGTTCAGGC CGAGCTGTTC ATCAGGCGGG GTGACGAGGA AGACTGGTAA
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Protein sequence | MLDTAREILI STYGFRDFQG LQKDIIEHTA SGGDALVLMP TGGGKSLCYQ IPSIMRQGTG IVISPLIALM QDQVDSLTQM GVRAAFLNSS LSPEKQREVE ARLLSGMLDL VYVAPERLVQ PAFLGLLERI TPALFAIDEA HCVSQWGHDF RPEYTRLTIL HEQFPHVPRI ALTATADGPT RRDIIRHLDL QDATVFSTGF DRPNISYTIQ PKDKPLEQLL HFIRTRHKGQ SGIVYRLSRK KVEETAAWLC AKGIEALPYH AGLNAIQRHH NQERFMREDG LVMVATVAFG MGVDKPDVRF VAHLEPPKSL EAYHQETGRA GRDGLPADAW MTYGLADVVQ LRRMLGQGEE DSPRRMVELR KLDAMLAFCE TTECRRKVLL GYFGEHDREP CGNCDTCQFP VETWDGTVAA QKALSAVYRT GQRFGAAHLT DILTGKLTDR IRSHGHNDLK TFGCGKELGA SQWKGVFRQL ACLGLLATDA DGHGGLRLTP ESWQVLRGER MLSFRRDILG RSATRALAKT QADAALQNAL NTEESRQLWD TLRSLRGRLA QERDVPPYAV FADRALLEMV CFRPRTPDDL QCIHGVGKAK LSMFGQEFLD ALLSHEAAWG RPDDLPALPE RRPATAAKKE NGLTDTIRET LQLFNKLQDM QAVAEARALK PATICNHLVR CIRHGELTTE QVVPLPAHEL AEIRGVLGET ASLGGVTAAH GRLKGRYDFE TLRLVQAELF IRRGDEEDW
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