Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2432 |
Symbol | glyA |
ID | 3757448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2453220 |
End bp | 2454458 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637783328 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_388924 |
Protein GI | 78357475 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.139104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGAAC TGCTTATTCA GGATCCGGAA GTCGGTCGCG CCATTGTTCA GGAAGTGGAA CGTCAGACCG GCAAGCTGGA ACTCATCGCC TCTGAAAACT TTGTGTCCCC CGCAGTCCGC GCCGCACAGG GCAGCGTGCT GACCCATAAA TACGCCGAAG GATACCCCGG CAAGCGGTAT TACGGCGGTT GCGAATTTGT CGACGTGGCG GAAAACCTCG CCATCGACCG CGCCTGCGAA ATATTCGGCG CCCAGTACGC CAACGTCCAG CCCCACTCCG GCAGCCAGGC CAATATGGCC GTATACTTTT CCGCGCTGAC TCCCGGCGAC ACCATTCTGG CCATGGATCT GTCGCACGGC GGACACCTGA CCCACGGCAG CCCCGTCAAC TTTTCGGGCC GGTTCTACAA TGTGGTGTTC TACGGTGTCT CGCGCGAAAC CGGCTGCATA GATTATGACA GCGTGGCAGA ACTGGCACGC GAGCACCGCC CCGCCATGAT TGTGGCCGGT GCCAGCGCCT ACTCCCGCAT CATCGATTTT GCACGGTTCC GCGCCATAGC CGACGAAGTG GGTTCCCTGC TTATGGTCGA CATGGCCCAC ATAGCCGGTC TGGTGGCCGC CGGTCTGCAT CCTTCCCCTG TGGGCACGGC GCACTTCACC ACCACAACCA CGCACAAAAC CCTGCGCGGT CCGCGTGGCG GCATGATTCT GTCGGACGAA GAAGCCGCCA AAAAACTGAA CAGCCAGATT TTCCCCGGCA TTCAGGGCGG CCCGCTCATG CATGTCATCG CCGCCAAGGC TGTGGCCTTC GGCGAAGCGC TGCGTCCCGA ATTCGGCGCC TACCAGAAGC AGGTGGTCGC CAACGCCGCC AAACTGGCCG CCACCCTGAC CGATGCCGGT TTTGAACTGG TTTCCGGCGG CACCGACAAC CACCTGATGC TGGTGGACCT GACAAACAAG GATATCACCG GTAAAGATGC CCAGCATGCG CTTGACCTTG CGGGCATCAC CGCCAACAAA AACACGGTGC CTTTTGAAAC CCGCTCGCCT TTCGTGACTT CGGGCATCCG GCTGGGTACC CCTGCCCTGA CCACCCGCGG CATGAAAGAA GCTGAAATGG TCAAAGTGGC CGGCTGGATA ATCGACGCGC TGGGCAATAT CGGCAACGAA ACCCGTCTGG CGGAAATAAG CCGCGACGTG GAAAAGTTCG CCCGTCAGTT CCCGCTGTTC CACTGGTAA
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Protein sequence | MDELLIQDPE VGRAIVQEVE RQTGKLELIA SENFVSPAVR AAQGSVLTHK YAEGYPGKRY YGGCEFVDVA ENLAIDRACE IFGAQYANVQ PHSGSQANMA VYFSALTPGD TILAMDLSHG GHLTHGSPVN FSGRFYNVVF YGVSRETGCI DYDSVAELAR EHRPAMIVAG ASAYSRIIDF ARFRAIADEV GSLLMVDMAH IAGLVAAGLH PSPVGTAHFT TTTTHKTLRG PRGGMILSDE EAAKKLNSQI FPGIQGGPLM HVIAAKAVAF GEALRPEFGA YQKQVVANAA KLAATLTDAG FELVSGGTDN HLMLVDLTNK DITGKDAQHA LDLAGITANK NTVPFETRSP FVTSGIRLGT PALTTRGMKE AEMVKVAGWI IDALGNIGNE TRLAEISRDV EKFARQFPLF HW
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