Gene Dde_2432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2432 
SymbolglyA 
ID3757448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2453220 
End bp2454458 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content61% 
IMG OID637783328 
Productserine hydroxymethyltransferase 
Protein accessionYP_388924 
Protein GI78357475 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.139104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAAC TGCTTATTCA GGATCCGGAA GTCGGTCGCG CCATTGTTCA GGAAGTGGAA 
CGTCAGACCG GCAAGCTGGA ACTCATCGCC TCTGAAAACT TTGTGTCCCC CGCAGTCCGC
GCCGCACAGG GCAGCGTGCT GACCCATAAA TACGCCGAAG GATACCCCGG CAAGCGGTAT
TACGGCGGTT GCGAATTTGT CGACGTGGCG GAAAACCTCG CCATCGACCG CGCCTGCGAA
ATATTCGGCG CCCAGTACGC CAACGTCCAG CCCCACTCCG GCAGCCAGGC CAATATGGCC
GTATACTTTT CCGCGCTGAC TCCCGGCGAC ACCATTCTGG CCATGGATCT GTCGCACGGC
GGACACCTGA CCCACGGCAG CCCCGTCAAC TTTTCGGGCC GGTTCTACAA TGTGGTGTTC
TACGGTGTCT CGCGCGAAAC CGGCTGCATA GATTATGACA GCGTGGCAGA ACTGGCACGC
GAGCACCGCC CCGCCATGAT TGTGGCCGGT GCCAGCGCCT ACTCCCGCAT CATCGATTTT
GCACGGTTCC GCGCCATAGC CGACGAAGTG GGTTCCCTGC TTATGGTCGA CATGGCCCAC
ATAGCCGGTC TGGTGGCCGC CGGTCTGCAT CCTTCCCCTG TGGGCACGGC GCACTTCACC
ACCACAACCA CGCACAAAAC CCTGCGCGGT CCGCGTGGCG GCATGATTCT GTCGGACGAA
GAAGCCGCCA AAAAACTGAA CAGCCAGATT TTCCCCGGCA TTCAGGGCGG CCCGCTCATG
CATGTCATCG CCGCCAAGGC TGTGGCCTTC GGCGAAGCGC TGCGTCCCGA ATTCGGCGCC
TACCAGAAGC AGGTGGTCGC CAACGCCGCC AAACTGGCCG CCACCCTGAC CGATGCCGGT
TTTGAACTGG TTTCCGGCGG CACCGACAAC CACCTGATGC TGGTGGACCT GACAAACAAG
GATATCACCG GTAAAGATGC CCAGCATGCG CTTGACCTTG CGGGCATCAC CGCCAACAAA
AACACGGTGC CTTTTGAAAC CCGCTCGCCT TTCGTGACTT CGGGCATCCG GCTGGGTACC
CCTGCCCTGA CCACCCGCGG CATGAAAGAA GCTGAAATGG TCAAAGTGGC CGGCTGGATA
ATCGACGCGC TGGGCAATAT CGGCAACGAA ACCCGTCTGG CGGAAATAAG CCGCGACGTG
GAAAAGTTCG CCCGTCAGTT CCCGCTGTTC CACTGGTAA
 
Protein sequence
MDELLIQDPE VGRAIVQEVE RQTGKLELIA SENFVSPAVR AAQGSVLTHK YAEGYPGKRY 
YGGCEFVDVA ENLAIDRACE IFGAQYANVQ PHSGSQANMA VYFSALTPGD TILAMDLSHG
GHLTHGSPVN FSGRFYNVVF YGVSRETGCI DYDSVAELAR EHRPAMIVAG ASAYSRIIDF
ARFRAIADEV GSLLMVDMAH IAGLVAAGLH PSPVGTAHFT TTTTHKTLRG PRGGMILSDE
EAAKKLNSQI FPGIQGGPLM HVIAAKAVAF GEALRPEFGA YQKQVVANAA KLAATLTDAG
FELVSGGTDN HLMLVDLTNK DITGKDAQHA LDLAGITANK NTVPFETRSP FVTSGIRLGT
PALTTRGMKE AEMVKVAGWI IDALGNIGNE TRLAEISRDV EKFARQFPLF HW