Gene Dde_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2427 
Symbol 
ID3757443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp2448458 
End bp2449501 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content59% 
IMG OID637783323 
Productputative glycerol-3-phosphate acyltransferase PlsX 
Protein accessionYP_388919 
Protein GI78357470 
COG category[I] Lipid transport and metabolism 
COG ID[COG0416] Fatty acid/phospholipid biosynthesis enzyme 
TIGRFAM ID[TIGR00182] fatty acid/phospholipid synthesis protein PlsX 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0198175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATA GCGTTCCGGT GATCGCCGTG GACGCCATGG GCGGGGATCA CGGTCCCTCC 
ATAGTTGTTC CCGGCGCCGT TCGGGCCGCC CGCGAAAACA GTCTGAAGCT TATCCTGGTA 
GGCGACAAGG ACGCAATCAG CGCGGAACTC AATAGGCTGC CCCTTGACGG GGTGGCCTAT 
GATATTGTGC ACGCCAGTCA GGTGGCGGGC ATGGAGGAAA AACCCTCCGA CATCCTGCGC 
CGCAAAAAGG ATGCCTCCGT ACAGGTGGCA TGCAGGCTGG TGCGTTCCGG TGATGCAGAC 
GGCATCGTCA GCGCCGGCAA CTCCGGTGCC ACAGTGGCAT GCGGCATGTT CATCATGGGG 
CGCATTCCCG GTGTGGAGCG TCCGGCACTG GCATCTGTGA TGCCCACGGA AAAAAAGCCC 
TGCGTTCTTC TGGACGTGGG CGCCAACGTG GACTGCAAAC CCTATCACCT TTTCCAGTTC 
GGCCTGATGG CCGAAGCCTT TGCCCGCGAC CTGCTGGAAA TCGAAACACC CCGCGTGGGT 
CTTTTGAGTA TCGGCGAAGA GGAAGGCAAG GGTAACTCTC AGGTGAAGGA AGCGTACGAA 
TTGCTGCGCG AAGCCAAAAA TATCAATTTT GTCGGAAACA TAGAAGGGTG CGACCTGTTT 
ACCGGCAATG TTGATGTCGC CGTGTGCGAC GGCTTTGTAG GCAACGTTGC GCTGAAGCTG 
AGCGAAGGGC TTGCCAGCTC GCTTGCCCGT CTGCTCAAGC GCGAACTGCT TACCGGCATC 
AAAGCCAAGA TAGGCACTTT TCTGGCGCGT GACGCGTTCC GGCGCTTTGC CCGCTTTGTG 
GATTACGCCG AATACGGCGG CGCGCCCCTG CTCGGCTTGC AGGGTATCGC CATCGTGTGC 
CATGGTGCTT CCAATGAAAA GGCCATCGCT TCTGCCGTAG GCATGGCGGG CACCTTCGTT 
TCCAAGGGCA CCTACCACCA CCTTGTGGAG ACCATCAGTG CCAACGAAGA GCTGACCAGC 
TACGGCAAGG CCGTCAAGCA ATAA
 
Protein sequence
MSNSVPVIAV DAMGGDHGPS IVVPGAVRAA RENSLKLILV GDKDAISAEL NRLPLDGVAY 
DIVHASQVAG MEEKPSDILR RKKDASVQVA CRLVRSGDAD GIVSAGNSGA TVACGMFIMG 
RIPGVERPAL ASVMPTEKKP CVLLDVGANV DCKPYHLFQF GLMAEAFARD LLEIETPRVG 
LLSIGEEEGK GNSQVKEAYE LLREAKNINF VGNIEGCDLF TGNVDVAVCD GFVGNVALKL 
SEGLASSLAR LLKRELLTGI KAKIGTFLAR DAFRRFARFV DYAEYGGAPL LGLQGIAIVC 
HGASNEKAIA SAVGMAGTFV SKGTYHHLVE TISANEELTS YGKAVKQ