| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2378 |
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| Symbol | |
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| ID | 3757394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2401832 |
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| End bp | 2403226 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637783274 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_388870 |
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| Protein GI | 78357421 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0197332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGAAA GAACTTTCCA TATAATGACC TTTGGCTGCC AGATGAACGT CAACGATTCC
GACTGGCTGG CGCGTGCCCT GGAAGCCCGC GGCTTTACAC AGGTTCCGGA ACATGAGGCC
GCCATATACA TCATCAACAC CTGTTCAGTC CGCGACAAAC CGGAACAGAA AGTCTATTCA
CTGCTCGGAC GCATACGCAG AGAAACAAAA AACAGACGGA ATGTGACCGT ATGTGTGGGC
GGCTGCGTGG CGCAGCAGAT AGGCAAAGGC TTTTTCAAGC GGTTCAGTCA GGTCCGGCTG
GTATTCGGCA CCGACGGGGC AGCCAGCGCG CCGCAGGCCA TCGAACGGCT GGTGCAGGAA
CCGCACGCCC GCATCAGCCT GCTGGATTTT TCCGAAGAAT TTCCCGAACG CGATGCAGGG
TGGGAAAACG GCGAAGTACC TGTCTCCGCG TATGTCAATA TTATGCAGGG GTGCAACAAC
TTCTGCGCAT ACTGCATTGT GCCCTACACC CGCGGCAGGC AGAAATCGCG CAGTTCGGCC
GCCGTGCTGG ACGAATGCAG AACGCTGGTC GGCAACGGAG CGCGGGAAAT CACCCTGCTG
GGGCAGAACG TTAATTCCTA CGGGCTTGAT CCGCACGGCG ACGGGACAAC GTTTGCCCGG
CTGCTGCATG ACGTGGCTGC CATACCCGGT CTTGAAAGGC TGCGTTTCAT GACTCCGCAT
CCCAAAGACA TAGCCGGTGA AGTCATTGAA GCCTTCGGAG CGCTGAAAAA TCTCTGCCCC
AGAGTACACC TGCCGCTGCA GTCCGGTTCT GACAGAGTGC TCAAAGCCAT GGGCCGCAAA
TACGACATGG CCCGCTACAT GGACATTGTT ACCCGTCTGA AAGCGGTCCG CCCCGACATT
CAGATAACCA GCGACCTCAT AGTCGGTTTT CCGGGCGAAA CGGAAGCAGA TTTTGAACAG
ACGCTGGAAG CCATGCGCAC CGTGCCCTTT GTTCAGAGCT TTTCATTCAT CTATTCCGAC
AGGCCCGGCA CACGGGCTGA GATGCTGCCC GGCAAGCTTT CGCGCGAAGA AAAAACCGCA
CGGCTTGTCA GGCTGCAGGA AGTGCAGAAT GAATACAGTG AAGCAGCGCT GCAGGCTATG
GTCGGCAAAA CAGTCATGGT GCTGTTTGAA AGCCCCAGCC CCAAAAGTGC AGCCGGTTCC
GGTACGGACG CACAGAATGC AGCGGAAGAA TCGGGCCGGA CGGCATCCTC ATGGCAGGGA
CGGGACGAGC ACGGCTTTAT ACTGAACGTG CACCTGCCCG CACCCGCAGA CCTGTACGGC
AAAATAATGC CCGTCACAGT GACCGCCGCA CGCAAACACT CGCTGACGGG CGAACCCGCG
GGGGAATCAT GCTGA
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| Protein sequence | MHERTFHIMT FGCQMNVNDS DWLARALEAR GFTQVPEHEA AIYIINTCSV RDKPEQKVYS
LLGRIRRETK NRRNVTVCVG GCVAQQIGKG FFKRFSQVRL VFGTDGAASA PQAIERLVQE
PHARISLLDF SEEFPERDAG WENGEVPVSA YVNIMQGCNN FCAYCIVPYT RGRQKSRSSA
AVLDECRTLV GNGAREITLL GQNVNSYGLD PHGDGTTFAR LLHDVAAIPG LERLRFMTPH
PKDIAGEVIE AFGALKNLCP RVHLPLQSGS DRVLKAMGRK YDMARYMDIV TRLKAVRPDI
QITSDLIVGF PGETEADFEQ TLEAMRTVPF VQSFSFIYSD RPGTRAEMLP GKLSREEKTA
RLVRLQEVQN EYSEAALQAM VGKTVMVLFE SPSPKSAAGS GTDAQNAAEE SGRTASSWQG
RDEHGFILNV HLPAPADLYG KIMPVTVTAA RKHSLTGEPA GESC
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