Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2349 |
Symbol | |
ID | 3757365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2368887 |
End bp | 2369960 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637783245 |
Product | TetR family transcriptional regulator |
Protein accession | YP_388841 |
Protein GI | 78357392 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00426882 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTATG TTGGGCGCAC CGGACCGTTG CGGTCCGGGA ATCCCCCCTG CGGGTCTGCA AAGAACCTTA ACTATTATCG GAGAACACCA TGGAAAACAG AACTCTTACT TCCGGTCCCG GCAAAGATTC CTGCAAAATG GCCACCCTGC CCCCCGCAAC TCTGGCCTCC GGCCCCGGTA AAGACAGCTG CAAGATGGCC TCGCTTCCTT CGCACTCTGC CTGCGAATAA TCCCCCCGCA CCAATTATCA GGCGGCCTTC GGGCCGCCCT TTTTTATGCC CCTCAAAATC AGCCACTGTC CGCAAAAGAC CGCACTTTTC CCCCCCTGTT GCGCACGGCA TCTGCAGCGG GTCTTTCCGT CTCCGGCACC CGTGCCTGCC TCCGGTATTG TACCGCGTCT CCCGCGGTTG TTGTGTACTG CACTTGCGCA ACATGACAGC CTTACGGCGG CATGATTTGC GCGCTGCCGT TATTGACAAA AAAACATACC AGATGGTATG TTTTGCCATG GCAATAGCTC ACCGCAAAAA AAAAGAGCCA GAAAAAGTCC GGCGCGCACT GCTGGACTGC GCTGCCGCCA TTGCTGTTTC CAAGGGTTTT TCAGGACTTA CAGTACAAGC TGTGGCAGAT GGAGCCGGAG TGACCAAGGG CGGTTTTTTT CATCACTTTC CCAGCAAACA GGCCCTGATG GATGAAGTAT GCGCGGAACT CCTGCGCTCC ATTGATGCCC TTGTGGACGA ATATATGGCG CAGGAACCGC AAGGGTACGG TGCATTCACC CGCGCGTATG TACAGGCCAT ACTCACGCCG GCAGAAAAAA GCAGCCCGTG GGTTTCGCTT TCCGTGGCGC TGGTGGCCGA CCCGCAGCTG CGGTCGCTGT GGACAGGCTG GCTGCAACAG CGGCTGAACA GACACCGCCA GACAGACAAC CATGCCGCGC TGGCCTTTGC CCGCTACGCG GCAGACGGCA TCTGGCTGGA AGACCTGATG CTGGGCAAAA AGCGTTCAGC CGGTGAAACA GCCAGACTGC AGAAACAGCT GCTGGCGCTC ATAGACAGGA AACAGGAAGC ATGA
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Protein sequence | MEYVGRTGPL RSGNPPCGSA KNLNYYRRTP WKTELLLPVP AKIPAKWPPC PPQLWPPAPV KTAARWPRFL RTLPANNPPA PIIRRPSGRP FLCPSKSATV RKRPHFSPPV AHGICSGSFR LRHPCLPPVL YRVSRGCCVL HLRNMTALRR HDLRAAVIDK KTYQMVCFAM AIAHRKKKEP EKVRRALLDC AAAIAVSKGF SGLTVQAVAD GAGVTKGGFF HHFPSKQALM DEVCAELLRS IDALVDEYMA QEPQGYGAFT RAYVQAILTP AEKSSPWVSL SVALVADPQL RSLWTGWLQQ RLNRHRQTDN HAALAFARYA ADGIWLEDLM LGKKRSAGET ARLQKQLLAL IDRKQEA
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