| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2349 |
|---|
| Symbol | |
|---|
| ID | 3757365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 2368887 |
|---|
| End bp | 2369960 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637783245 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_388841 |
|---|
| Protein GI | 78357392 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00426882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTATG TTGGGCGCAC CGGACCGTTG CGGTCCGGGA ATCCCCCCTG CGGGTCTGCA
AAGAACCTTA ACTATTATCG GAGAACACCA TGGAAAACAG AACTCTTACT TCCGGTCCCG
GCAAAGATTC CTGCAAAATG GCCACCCTGC CCCCCGCAAC TCTGGCCTCC GGCCCCGGTA
AAGACAGCTG CAAGATGGCC TCGCTTCCTT CGCACTCTGC CTGCGAATAA TCCCCCCGCA
CCAATTATCA GGCGGCCTTC GGGCCGCCCT TTTTTATGCC CCTCAAAATC AGCCACTGTC
CGCAAAAGAC CGCACTTTTC CCCCCCTGTT GCGCACGGCA TCTGCAGCGG GTCTTTCCGT
CTCCGGCACC CGTGCCTGCC TCCGGTATTG TACCGCGTCT CCCGCGGTTG TTGTGTACTG
CACTTGCGCA ACATGACAGC CTTACGGCGG CATGATTTGC GCGCTGCCGT TATTGACAAA
AAAACATACC AGATGGTATG TTTTGCCATG GCAATAGCTC ACCGCAAAAA AAAAGAGCCA
GAAAAAGTCC GGCGCGCACT GCTGGACTGC GCTGCCGCCA TTGCTGTTTC CAAGGGTTTT
TCAGGACTTA CAGTACAAGC TGTGGCAGAT GGAGCCGGAG TGACCAAGGG CGGTTTTTTT
CATCACTTTC CCAGCAAACA GGCCCTGATG GATGAAGTAT GCGCGGAACT CCTGCGCTCC
ATTGATGCCC TTGTGGACGA ATATATGGCG CAGGAACCGC AAGGGTACGG TGCATTCACC
CGCGCGTATG TACAGGCCAT ACTCACGCCG GCAGAAAAAA GCAGCCCGTG GGTTTCGCTT
TCCGTGGCGC TGGTGGCCGA CCCGCAGCTG CGGTCGCTGT GGACAGGCTG GCTGCAACAG
CGGCTGAACA GACACCGCCA GACAGACAAC CATGCCGCGC TGGCCTTTGC CCGCTACGCG
GCAGACGGCA TCTGGCTGGA AGACCTGATG CTGGGCAAAA AGCGTTCAGC CGGTGAAACA
GCCAGACTGC AGAAACAGCT GCTGGCGCTC ATAGACAGGA AACAGGAAGC ATGA
|
|---|
| Protein sequence | MEYVGRTGPL RSGNPPCGSA KNLNYYRRTP WKTELLLPVP AKIPAKWPPC PPQLWPPAPV
KTAARWPRFL RTLPANNPPA PIIRRPSGRP FLCPSKSATV RKRPHFSPPV AHGICSGSFR
LRHPCLPPVL YRVSRGCCVL HLRNMTALRR HDLRAAVIDK KTYQMVCFAM AIAHRKKKEP
EKVRRALLDC AAAIAVSKGF SGLTVQAVAD GAGVTKGGFF HHFPSKQALM DEVCAELLRS
IDALVDEYMA QEPQGYGAFT RAYVQAILTP AEKSSPWVSL SVALVADPQL RSLWTGWLQQ
RLNRHRQTDN HAALAFARYA ADGIWLEDLM LGKKRSAGET ARLQKQLLAL IDRKQEA
|
|---|
| |