| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2334 |
|---|
| Symbol | |
|---|
| ID | 3757345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 2351569 |
|---|
| End bp | 2353671 |
|---|
| Gene Length | 2103 bp |
|---|
| Protein Length | 700 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637783225 |
|---|
| Product | succinyl-CoA synthetase (ADP-forming) alpha subunit / succinyl-CoA synthetase (ADP-forming) beta subunit |
|---|
| Protein accession | YP_388826 |
|---|
| Protein GI | 78357377 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit
[COG0074] Succinyl-CoA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit
[TIGR01019] succinyl-CoA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.530303 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCTGA ATGAGCATAT GAGCAAGGTG CTGTTTGCCG AAGCCGGAAT AGATACCCCT
GCGGGCGACT TGCTGACGCC CGGTCAGCTG GCGGAATATA CTCCTGCCGT GTCCGCCCCG
TGGTTTCTCA AGGCGCAGGT GCTTACCGGC GGAAGAGGCA AGGCCGGAGG CATACGCCGT
GCCGCCACCC TGAAGGAGCT CAGAGAGACG GCTCAGGACA TGTTCACCAT GGAAATCAAA
GGACACAGGG TGCCCTTTCT GCGTATCGAA TCCGCCACGG ACATACGCAG GGAATGCTAT
CTTTCTTTTG TACTTTCGCG CGAACGGCGT GACCTGCTGC TTACCACCAG CAGAGCGGGC
GGTATTCATG TGGAGAGTTC CACCGGTCAG CAGAAGCCGC TTGTGCAGCG GGTTCCGCTG
GACAGCGGCC TGCGCGAGCA TCATCTGCGT GCGGCTTTTT TTGAAATGGG AGTTGAAAAG
GAGCACTGGG CCGGTTTCAA GGCCATGGCG GAAAAACTGT ACAGGGCGGT AAGAGAGTAC
GGTCTGCTGC TGGCCGAGAT CAACCCTCTG GTGCTTACCT GCGACGGCCG CTGGGTGGCA
CTGGACGGCA AGGTTGAGCT GGACGACAGT GTGGTGGACC TGCAGCCCGA TCTCGAACGG
TTCTATACGC CGGAACATCA TTCGCGTGAA GAGAATCTGG CCCGCGAAGC CGGACTCAGC
TATGTGGAGC TTAAAGGCTG GGTGGGGATT CTGGTCAACG GGGCCGGACT GGCCATGGCC
ACAATGGACC TTCTTAATTT TTCCGGTCTG TCGGCGGCAA ACTTCATGGA TCTGGGCGGT
GCGGCCGATG CGTCGCGTAT GCGCCGCGCA CTTGATCTGC TGTTTGAAAA CCGCAATGTG
CGCGCGGTGT TCATCAACCT GTTCGGGGGT ATTGTTTCGT GCGCCGATGT GGCCCGCGCG
CTTGTGGACG CACTGGAGGG CGGTGATGCG CCAAAGCCCA TTGTGGTGCG TATGGCAGGC
CACGAATCCG CAGAAGGGCG GGCGCTGCTG CATGACTTTG CTCATCCTTC GGTAACCATA
GCACAGGAAA TGCACGAAGC GCTGGACGCG CTGCGGTCCA TGAAACCCGC AGATGTCCCC
CGTATTGAAT TTCCGTTGCC GCAGGAACCT GATCCGGTGC CGCAGCATAA CGGGCAGGAA
GCTGCCGCCT GTGTGCCGGT GTATAACGGC ATGGGGCTGG ACAGCAGCTC CGGCGTGCTG
GTGCAGGGGC TCACAGGCCG CGTTGCCCAG CGGCATGCCG CCTTGATGAT GGAATACGGC
ACGCGGGTTG TGGCGGGGGT CACTCCCTTT AAAGGCGGGC AGGAGGTGAT GGGGATTCCG
GTGTATGATT CCGTGCATGA GGCGTGCAGG CATCACCGTA TTGATGCTTC CATCATTTTT
GTACCGGCCG CATTTGCCCC CGATGCCGTG CTGGAGGCCG CAGCGGAAGA AATTCCGTGG
GTTGTGTGCA TTACTGAAGG AATACCTCAG GCGGCCATGC TGTCGGCTCT GAAAAATATC
CAGCCGTCGC CCACTTGTGT GGTGGGGCCG AATACTCCGG GCATAGTGGT TCCGCATCAG
CTTAAAATAG GTATCATGCC GGGTTATGTG TTCAGCCCCG GCCCTGTGGC GGTGTTTTCG
CGTTCGGGCA CGCTTACCTA TGAGGCAGCT TCGCGCCTTT CCGCTGCGGG CATAGGGCAA
TCCGTATGCG TGGGGGTGGG CGGAGATTCG TTTGTGGGCA CCGGCTTTGT GGACCTGTGC
GAAAGAGTGC GCCACGATGC CGCCACCCGT GCGGTGCTGG TGCTGGGCGA AGTGGGCGGC
AGGGCCGAAG AGGAACTGGC AGAATACGTA CGCAGGACAG GTTTTTCCAA ACCGGTGGTT
TCATTTGTGG CGGCGCGTAC TGCTCCTCCC GGCCGCAGGC TGGGGCATGC CGGAGCCATT
CTGGACGAAA CCACCGGCGG AGTGGAGGCT AAACTGCAGG CCATGCGCGA GGCCGGTTTT
ACCATCTGCC CTGATCTGGC AAGTCTGCCG CGCATTATGC GCGCTGTTCT TGACAGGGCA
TGA
|
|---|
| Protein sequence | MFLNEHMSKV LFAEAGIDTP AGDLLTPGQL AEYTPAVSAP WFLKAQVLTG GRGKAGGIRR
AATLKELRET AQDMFTMEIK GHRVPFLRIE SATDIRRECY LSFVLSRERR DLLLTTSRAG
GIHVESSTGQ QKPLVQRVPL DSGLREHHLR AAFFEMGVEK EHWAGFKAMA EKLYRAVREY
GLLLAEINPL VLTCDGRWVA LDGKVELDDS VVDLQPDLER FYTPEHHSRE ENLAREAGLS
YVELKGWVGI LVNGAGLAMA TMDLLNFSGL SAANFMDLGG AADASRMRRA LDLLFENRNV
RAVFINLFGG IVSCADVARA LVDALEGGDA PKPIVVRMAG HESAEGRALL HDFAHPSVTI
AQEMHEALDA LRSMKPADVP RIEFPLPQEP DPVPQHNGQE AAACVPVYNG MGLDSSSGVL
VQGLTGRVAQ RHAALMMEYG TRVVAGVTPF KGGQEVMGIP VYDSVHEACR HHRIDASIIF
VPAAFAPDAV LEAAAEEIPW VVCITEGIPQ AAMLSALKNI QPSPTCVVGP NTPGIVVPHQ
LKIGIMPGYV FSPGPVAVFS RSGTLTYEAA SRLSAAGIGQ SVCVGVGGDS FVGTGFVDLC
ERVRHDAATR AVLVLGEVGG RAEEELAEYV RRTGFSKPVV SFVAARTAPP GRRLGHAGAI
LDETTGGVEA KLQAMREAGF TICPDLASLP RIMRAVLDRA
|
|---|
| |