Gene Dde_2320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2320 
Symbol 
ID3757331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2337250 
End bp2338635 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content55% 
IMG OID637783211 
ProductDnaA family protein 
Protein accessionYP_388812 
Protein GI78357363 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0326594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAACG CTTGGGCGCA AATTGAACAT ACTCTCCGCG ACAATCTGAA TCCGGGCCTT 
TTTAAGGTCT GGATCAAACC GCTTGCTGCA GAGCAGGCCG GTGACTCTCT TCGTCTTGTC
GCGCCCAATG CCTTCGTTGC CAGCTGGGTC CGCGACAGGC TAATGAACGA AATCGAAAAA
GCCGCTGCCT CTGTGCTTGG CAGTGTGCCC ACCATTACCG TTGTATCCGG TGAAGAGCCC
GCCGCCGCCC CCAGACCGGT GCAGGTGCCC GCGCAGAAGC GTCCGGCAGC TGCCAGAACC
AGCGGTGCCG AGCAGATGGG GCTGCCCCTG CATTATGCGT CCCGTTCTGC GGACAGCATC
AAATGGATGC ACAGTTTTGA TGAATTTGTT GTGGGGCCAA GCAACCAGAT GGCCTTTGCG
GCGTCACAGG ATATCTGCCA GCAGTCTTTC CGCAGCGACA CTCTTTTTCT CAGCTCCGAC
CCCGGGCTCG GAAAAACACA CCTTCTGCAT GCCGTGGGGC AGCAGCTTTG CAATATCAGC
AACCGTACCC TGCCCCGTGT GGAGTATCTG ACAGCGGAAG AATTTGCCAC GCGGCTTATC
TGTGCGCTGA AAGCAAAGGA AGTGGACCGC TTTAAAGCCC GTTACCGCGA TGTGGATGTG
CTGCTGCTTG AAGATGTCCA CTTTCTTCAG GGCAAACAGC GCATGCAGGA CGAAGTGCTT
TCCACCGTGA AGGCTTTGCA GTCGCGCGGG GCCAAGGTGC TGTTTTCCAG CTCGTTTGCA
CCCAAAGACC TGAATGACCT TGATTCGCAG CTCACCTCGC GTTTCTGTTC AGGATTGCTG
GCCGTCATTG AAAAGCCGAC ATTTGAAACC CGGAAACAGA TTCTGCGCGA AAAAGCCCGC
CTGCACCATG TGCAGCTGCC CGAACAGGTG GCTGATCTGC TGGCAGACAA TATCCGCGCC
GATGTGCGTC AGATAGAAAG CTGCCTGCGT AACCTGCTGC TCAAGGCGCG GTTGCTCAAC
CAGCAGATAA CCATGGACAT GGCGTGGGAG ATTATCGGCC ACTACGCCAA GCGCGAAGCG
GTGCTTGATA TTGATGCCAT CGTGCGTCAG ATATGCAGCG GGTTTGATAT TTCCAAAGAG
CAGCTGCAGT CCAGAAGCCG CCGCCGCGAG CTTGTCATAG CGCGCAACAC GGCTTTCTTT
CTTGCCCGCA AGCATACCGA CCTTTCGCTG GAAGAAATCG GTAAGCGTTT CAACCGCAAG
CATTCCACGG TTATCAAAGG TATAGCCAAC ATAGAGCGTG AAATGAATAA GGAAACACCG
CTGGGCAGAC AGGTGGTGAA CGCAGTAAAT ATGGTGGAAC GCAACGGACG AATTATTCAC
CCCTGA
 
Protein sequence
MINAWAQIEH TLRDNLNPGL FKVWIKPLAA EQAGDSLRLV APNAFVASWV RDRLMNEIEK 
AAASVLGSVP TITVVSGEEP AAAPRPVQVP AQKRPAAART SGAEQMGLPL HYASRSADSI
KWMHSFDEFV VGPSNQMAFA ASQDICQQSF RSDTLFLSSD PGLGKTHLLH AVGQQLCNIS
NRTLPRVEYL TAEEFATRLI CALKAKEVDR FKARYRDVDV LLLEDVHFLQ GKQRMQDEVL
STVKALQSRG AKVLFSSSFA PKDLNDLDSQ LTSRFCSGLL AVIEKPTFET RKQILREKAR
LHHVQLPEQV ADLLADNIRA DVRQIESCLR NLLLKARLLN QQITMDMAWE IIGHYAKREA
VLDIDAIVRQ ICSGFDISKE QLQSRSRRRE LVIARNTAFF LARKHTDLSL EEIGKRFNRK
HSTVIKGIAN IEREMNKETP LGRQVVNAVN MVERNGRIIH P