Gene Dde_2281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2281 
Symbol 
ID3757292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2301312 
End bp2302631 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content58% 
IMG OID637783172 
Productferredoxin hydrogenase 
Protein accessionYP_388773 
Protein GI78357324 
COG category[R] General function prediction only 
COG ID[COG4624] Iron only hydrogenase large subunit, C-terminal domain 
TIGRFAM ID[TIGR02512] hydrogenases, Fe-only 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGAT GCAAAGCACA GCACCCGCCC GCAGCCTATC TGGCAGGGTT GGAAGTACCT 
GCCGCAGGCT CCGAGGTAAC CATGGAAGGT GTTCGTTATA AAATGAACGC CCCCAAGGAT
GTAGACCCCG CAACCATCCG GTTTGTGGAG GTCGACCACG ACAAGTGCAT GGCGTGCGGC
GAGTGTGAGT ATCACTGTCC CACAGGCGTC ATGCAGGAAG TGACCGAAGA CGGCTATCGC
GGTGTCGTGG ACCCCGTGGC GTGCGTCAAC TGCGGGCAGT GTCTTGCAAA CTGTCCCTTC
GGCGCCATCC ATGAAGAGGT GTCGTTTGTA GGCGAATTGT ACGAAAAACT CAAGGATCCT
GACACGGTTG TCGTATCCAT GCCTGCTCCC GCCGTGCGCT ATGCGCTGGG TGAATGCTTC
GGGCTGCCTA CGGGTACGTA TGTGGGCGGG CAGATGCATG CCGCCCTGCG CCGTCTGGGC
TTTAATCTGG TGTGGGATAC GGAATGGACG GCTGACGTGA CCATCATGGA AGAGGGCACC
GAACTGCTGG AACGCGTGAA GCACGGCAAT ATGCCGCTGC CGCAGTTCAC TTCCTGCTGC
CCCGGGTGGA TCAAGTTTGC CGAAACGTTC TACCCCGATC TGGAAAAGCA CCTTTCCACC
TGTAAATCCC CCATTGCCAT GATCGGCCCG CTTGCCAAAA CGTATGGTGC GCAGGAGGCC
GGGGTACCCG CCAAAAAAAT GTACACCGTG TCCATCATGC CCTGCATAGC CAAAAAGTTT
GAAGGTATGC GGCCTGAAAT GAATGCCAGC GGGTACAGAG ACATCGACGC CACCATCACC
ACGCGTGAGC TGGCATGGAT GATTAAAAAA GCGGGCATCG ACTTCACTTC GCTGCCTTCC
GAAGAACCGG ATCCCGCGCT GGGCATGTCC ACTGGTGCTG CCACCATTTT CTGCACCAGC
GGCGGTGTAA TGGAAGCTGC CCTGCGTCTG GCGTATGAAG CGCTGTCCGG CGGCACCCTT
GCCGACCCCG ACATCAAGGT GGTGCGCACG CATGAGGGTA TAAATACGGC AGAAGTGCCC
GTACCCAACT TCGGCACCGT GAAAGTGGCC GTGGCAAGCG GTCTGGACAA TGCCGCCAAG
CTGTGCGAGG AAGTGCGCGC AGGCAAATCG CCTTACCACT TCATCGAGGT GATGACGTGT
CCCGGCGGCT GCGTAAACGG CGGCGGGCAA CCGCTTGAAC CGGGCATGCT GCAGTCTTCC
CTTTTCAAGA GCACTATCAC CAAGATCAAC CGTCGGTTTA CCAGACGGTC TGTGGCATAG
 
Protein sequence
MAGCKAQHPP AAYLAGLEVP AAGSEVTMEG VRYKMNAPKD VDPATIRFVE VDHDKCMACG 
ECEYHCPTGV MQEVTEDGYR GVVDPVACVN CGQCLANCPF GAIHEEVSFV GELYEKLKDP
DTVVVSMPAP AVRYALGECF GLPTGTYVGG QMHAALRRLG FNLVWDTEWT ADVTIMEEGT
ELLERVKHGN MPLPQFTSCC PGWIKFAETF YPDLEKHLST CKSPIAMIGP LAKTYGAQEA
GVPAKKMYTV SIMPCIAKKF EGMRPEMNAS GYRDIDATIT TRELAWMIKK AGIDFTSLPS
EEPDPALGMS TGAATIFCTS GGVMEAALRL AYEALSGGTL ADPDIKVVRT HEGINTAEVP
VPNFGTVKVA VASGLDNAAK LCEEVRAGKS PYHFIEVMTC PGGCVNGGGQ PLEPGMLQSS
LFKSTITKIN RRFTRRSVA