Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2281 |
Symbol | |
ID | 3757292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2301312 |
End bp | 2302631 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637783172 |
Product | ferredoxin hydrogenase |
Protein accession | YP_388773 |
Protein GI | 78357324 |
COG category | [R] General function prediction only |
COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGGAT GCAAAGCACA GCACCCGCCC GCAGCCTATC TGGCAGGGTT GGAAGTACCT GCCGCAGGCT CCGAGGTAAC CATGGAAGGT GTTCGTTATA AAATGAACGC CCCCAAGGAT GTAGACCCCG CAACCATCCG GTTTGTGGAG GTCGACCACG ACAAGTGCAT GGCGTGCGGC GAGTGTGAGT ATCACTGTCC CACAGGCGTC ATGCAGGAAG TGACCGAAGA CGGCTATCGC GGTGTCGTGG ACCCCGTGGC GTGCGTCAAC TGCGGGCAGT GTCTTGCAAA CTGTCCCTTC GGCGCCATCC ATGAAGAGGT GTCGTTTGTA GGCGAATTGT ACGAAAAACT CAAGGATCCT GACACGGTTG TCGTATCCAT GCCTGCTCCC GCCGTGCGCT ATGCGCTGGG TGAATGCTTC GGGCTGCCTA CGGGTACGTA TGTGGGCGGG CAGATGCATG CCGCCCTGCG CCGTCTGGGC TTTAATCTGG TGTGGGATAC GGAATGGACG GCTGACGTGA CCATCATGGA AGAGGGCACC GAACTGCTGG AACGCGTGAA GCACGGCAAT ATGCCGCTGC CGCAGTTCAC TTCCTGCTGC CCCGGGTGGA TCAAGTTTGC CGAAACGTTC TACCCCGATC TGGAAAAGCA CCTTTCCACC TGTAAATCCC CCATTGCCAT GATCGGCCCG CTTGCCAAAA CGTATGGTGC GCAGGAGGCC GGGGTACCCG CCAAAAAAAT GTACACCGTG TCCATCATGC CCTGCATAGC CAAAAAGTTT GAAGGTATGC GGCCTGAAAT GAATGCCAGC GGGTACAGAG ACATCGACGC CACCATCACC ACGCGTGAGC TGGCATGGAT GATTAAAAAA GCGGGCATCG ACTTCACTTC GCTGCCTTCC GAAGAACCGG ATCCCGCGCT GGGCATGTCC ACTGGTGCTG CCACCATTTT CTGCACCAGC GGCGGTGTAA TGGAAGCTGC CCTGCGTCTG GCGTATGAAG CGCTGTCCGG CGGCACCCTT GCCGACCCCG ACATCAAGGT GGTGCGCACG CATGAGGGTA TAAATACGGC AGAAGTGCCC GTACCCAACT TCGGCACCGT GAAAGTGGCC GTGGCAAGCG GTCTGGACAA TGCCGCCAAG CTGTGCGAGG AAGTGCGCGC AGGCAAATCG CCTTACCACT TCATCGAGGT GATGACGTGT CCCGGCGGCT GCGTAAACGG CGGCGGGCAA CCGCTTGAAC CGGGCATGCT GCAGTCTTCC CTTTTCAAGA GCACTATCAC CAAGATCAAC CGTCGGTTTA CCAGACGGTC TGTGGCATAG
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Protein sequence | MAGCKAQHPP AAYLAGLEVP AAGSEVTMEG VRYKMNAPKD VDPATIRFVE VDHDKCMACG ECEYHCPTGV MQEVTEDGYR GVVDPVACVN CGQCLANCPF GAIHEEVSFV GELYEKLKDP DTVVVSMPAP AVRYALGECF GLPTGTYVGG QMHAALRRLG FNLVWDTEWT ADVTIMEEGT ELLERVKHGN MPLPQFTSCC PGWIKFAETF YPDLEKHLST CKSPIAMIGP LAKTYGAQEA GVPAKKMYTV SIMPCIAKKF EGMRPEMNAS GYRDIDATIT TRELAWMIKK AGIDFTSLPS EEPDPALGMS TGAATIFCTS GGVMEAALRL AYEALSGGTL ADPDIKVVRT HEGINTAEVP VPNFGTVKVA VASGLDNAAK LCEEVRAGKS PYHFIEVMTC PGGCVNGGGQ PLEPGMLQSS LFKSTITKIN RRFTRRSVA
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