Gene Dde_2250 details

Gene Information

• Locus tag: Dde_2250
• Symbol: rplP
• ID: 3757261
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. G20
• Kingdom: Bacteria
• Replicon accession: NC_007519
• Strand: -
• Start bp: 2278441
• End bp: 2278854
• Gene Length: 414 bp
• Protein Length: 137 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637783141
• Product: 50S ribosomal protein L16
• Protein accession: YP_388742
• Protein GI: 78357293
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0197] Ribosomal protein L16/L10E
• TIGRFAM ID: [TIGR01164] ribosomal protein L16, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0000631878
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGACTC CTAAAAAGGT TAAATTCCGT AAGCGTCAGA AAGGACGGCT TAAGGGTGAC 
GCCCTCAAGG GTAACAATGT TGCTTTCGGA GAAATCGGCC TTAAGGTTCT GGAGCACGGC 
AAGCTGACCA GCCAGCAGAT TGAAGCTGCT CGTGTGGCTG CCATGCGTCA CATCAAGCGT 
GGCGGAAAGA TGTGGATTCG CATCTTCCCC GACCAGCCTT ACACCGCCAA GCCTCTTGAA 
ACCCGTCAGG GTAAAGGTAA AGGCGCTCCG GTGGGTTGGT ACGCTCCTGT GAAGCCCGGC 
CGTGTACTTT ACGAAATCAA AGGGGTAAAC CTTGAGCTGG CTCGCGAGGC TCTGACCCGC 
GCCGCTCATA AGCTCCCCGT GAAGACCACG ATCGTAGTTA GGGAGGGCCT CTAG 

 

Protein sequence

MLTPKKVKFR KRQKGRLKGD ALKGNNVAFG EIGLKVLEHG KLTSQQIEAA RVAAMRHIKR 
GGKMWIRIFP DQPYTAKPLE TRQGKGKGAP VGWYAPVKPG RVLYEIKGVN LELAREALTR 
AAHKLPVKTT IVVREGL