| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2245 |
|---|
| Symbol | rplE |
|---|
| ID | 3757256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 2276721 |
|---|
| End bp | 2277260 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637783136 |
|---|
| Product | 50S ribosomal protein L5 |
|---|
| Protein accession | YP_388737 |
|---|
| Protein GI | 78357288 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0094] Ribosomal protein L5 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00560978 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGTC TCCAAAATAT ATATCGTGAA CAAGTGGCGC CGGTGCTGCA GAAAGAGTTC
AACTACAAGA GCTCTATGCA GTTGCCGAAA CTGGAGAAGA TCTCCCTTAA CATCGGCCTT
GGCGAAGCCA GCCAGAACCA GAAGCTTCTG GAAGAGGCCG TGAAAGAACT GACCGCAATC
GCTGGGCAGA AGGCCGTGAT CACTCGCGCC AAAAAGTCCA TCGCTTCGTT CAAGCTGCGT
GAAGGCATGC CCATCGGCTG CCGCGTGACT CTTCGCGGTG ATTCCATGTG GGACTTCCTT
GACAAGCTCA TGAACTTCGC GCTTCCGCGC GTGCGTGACT TCCGGGGGAT TGCTGACCGT
GGCTTCGACG GCCGTGGTAA CTTCACCCTT GGAATTAAGG AACACACCAT CTTCCCCGAG
CTGGAAGTTG ACCGTGTTGA CAACCCCAAG GGCATGAACA TCACCATCGT GACCAGTGCC
AAGACTGACA AAGAAGGCAA GTTCCTGCTT GATAAGCTGG GCATGCCCTT CAAGAAGTAA
|
|---|
| Protein sequence | MTRLQNIYRE QVAPVLQKEF NYKSSMQLPK LEKISLNIGL GEASQNQKLL EEAVKELTAI
AGQKAVITRA KKSIASFKLR EGMPIGCRVT LRGDSMWDFL DKLMNFALPR VRDFRGIADR
GFDGRGNFTL GIKEHTIFPE LEVDRVDNPK GMNITIVTSA KTDKEGKFLL DKLGMPFKK
|
|---|
| |