Gene Dde_2242 details

Gene Information

• Locus tag: Dde_2242
• Symbol: rplF
• ID: 3757253
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. G20
• Kingdom: Bacteria
• Replicon accession: NC_007519
• Strand: -
• Start bp: 2275573
• End bp: 2276112
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637783133
• Product: 50S ribosomal protein L6
• Protein accession: YP_388734
• Protein GI: 78357285
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.0343464
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCGAA TCGGAAAACA GCCTATCCCC GTTCCTTCCG GCGTGGAAGT GAAGCTGGGA 
GCAGACGTTG TAGAGGTTAA GGGCCCCAAA GGCAGCCTGA CCACGCCGGT TTCGCCCCTG 
CTCAAATATG AGATTCAGGA CGGCTCTGTG GTTATCACCA GAGTCGAAGA AACCAAAAAG 
GCATCCGCCC AGCACGGCCT TCGCCGTACC CTTCTTGCAA ACTGCATCGA AGGTGTCTCC 
AAGGGATTCA GCAAAGTCCT TGAAGTCAAC GGTGTCGGTT ACAAGGTCGC CGTTAAAGGC 
AACAACATCG AGCTTGCTCT CGGTTTCTCC CACCCGGTGG TCATTGAACT GCCCAAGGGT 
ATCGAAGCCG CAGCCGCAGG AAACAAGCTG ACCATCAGCG GTTTCGACAA GCAGCTCGTT 
GGTGAAGTTG CTGCCAACAT TCGCCGTGTA CGTCCGCCCG AACCCTACAA GGGCAAGGGT 
GTTAAATATG AACACGAGCA GATTCGCCGT AAGGCCGGCA AGTCCGGCGG CAAAAAGTAG 

 

Protein sequence

MSRIGKQPIP VPSGVEVKLG ADVVEVKGPK GSLTTPVSPL LKYEIQDGSV VITRVEETKK 
ASAQHGLRRT LLANCIEGVS KGFSKVLEVN GVGYKVAVKG NNIELALGFS HPVVIELPKG 
IEAAAAGNKL TISGFDKQLV GEVAANIRRV RPPEPYKGKG VKYEHEQIRR KAGKSGGKK