Gene Dde_2240 details

Gene Information

• Locus tag: Dde_2240
• Symbol: rpsE
• ID: 3757251
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. G20
• Kingdom: Bacteria
• Replicon accession: NC_007519
• Strand: -
• Start bp: 2274685
• End bp: 2275176
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637783131
• Product: 30S ribosomal protein S5
• Protein accession: YP_388732
• Protein GI: 78357283
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.109311
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACAGA ACGAATTCGG CTTGATTGAG AAGATCGTCG ATCTCAACCG AGTTGCCAAG 
GTTGTGAAGG GCGGCCGTCG TTTCAGCTTC AGCGCCCTGG TAGTCGTTGG TGACGGCAAC 
GGGTCCGTAG GCTTCGGCAT GGGTAAAGCC CAGGAAGTGC CCGAGGCTCT GCGCAAGGCG 
ACCGAACGCG CTAAAAAAGG TATGGTGCAG GTTCCCCTGG TGGACGGCAC CCTGCCGTAT 
GAAGTGCTTG GTGCCTTCGG CGCCGGACGG GTGCTTCTGA AGCCCGCTTC CAAGGGTACC 
GGTATCATCG CCGGTGGCGC AGTGCGCGCC ATCATGGAAG CTGTCGGCAT TCACGACGTG 
CTTGCCAAGG CCATCGGCAC CAACAACCCG CACAATGTGC TCCGCGCTAC CATGGCAGGT 
CTGACCTCGC TGCGCAGTGC GGAATATGTG AGCCAGCTGC GCGGAAAGAA ACTGGAAGCG 
CCCAGAAAGT AA 

 

Protein sequence

MEQNEFGLIE KIVDLNRVAK VVKGGRRFSF SALVVVGDGN GSVGFGMGKA QEVPEALRKA 
TERAKKGMVQ VPLVDGTLPY EVLGAFGAGR VLLKPASKGT GIIAGGAVRA IMEAVGIHDV 
LAKAIGTNNP HNVLRATMAG LTSLRSAEYV SQLRGKKLEA PRK