Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2207 |
Symbol | ispG |
ID | 3757217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2247741 |
End bp | 2248820 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637783097 |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_388699 |
Protein GI | 78357250 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATTG CACGCAGAAA ATCGCGCGAA GTAACCATTG GAAACGTGCG TATCGGCGGA GATAATCCCG TAGTTGTCCA GAGCATGACC AACACCGATA CGCGTGACGT CGAGCAGACC GTGGAACAGA TCAACAGCCT TGCCGAAGCC GGCTGCGAGA TTGTCCGCGT GGCTGTGCTT AATGATGATG CTGCATGGGC TATCAGGCCG ATCAAAGATC AGGTCACGGT GCCGTTGGTG GCGGACATTC ATTTTGACCA TCGTCTCGCT GTTTCCGCTC TGGAGGCAGG CGTGGACGCC CTGCGCATCA ATCCGGGCAA CATCGGCGGT CAGAAAAACG TGGACAAGGT GGTGGATGCT GCCAAGGCCC ACGGTTCCGT CATCCGTGTG GGAGTGAACG GCGGTTCGCT GGAGCGCGAT CTGGTGGAAA AATACTGCGG TCCCACGCCG GAGGCCATGG TGGAAAGCGC TTTGCGCCAT GTGCGGATGC TGGAAGACCG CAATTTTGAC AACATCAAGA TTTCGCTCAA ATCCTCTTCC GTAACGGATA CTGTAACGGC CTACCGGCTG CTCGGGCAGC AGTGTGAATA TCCTTTGCAT ATCGGCGTGA CAGAAGCGGG CACCATGCTG CGCGGCTCTG TCAAGTCGTC GGTGGGCATA GGCATATTGC TGTGGCAGGG CATAGGTGAT ACTTTGCGGG TTTCGCTGAC GGAAGATCCC GTGGCCGAAA TGGCTGTGGC ATGGGAAATT CTGCGTTCGC TGGGGCTGCG TTTCCGCGGA CCGGAAATCA TATCCTGTCC TACCTGCGGC CGTACCGAAA TTGATCTCAT TTCGCTGGCC GGAGAGATTG AACGCAGGCT GCAGAACGAA ACCCAGAGTT TCAAAGTGGC AGTCATGGGC TGTGTGGTCA ACGGTCCGGG TGAAGCACGG GAAGCGGATA TCGGTATTGC CGGCGGCCGT GACAAGGGTA TCATTTTCCG CCACGGCGAG GTTATCCGGA CCGTGAAAGG CGGTTCCAAC CTGCTGGCTG CTTTTAATGA AGAACTGGAT AAATTTTTGG CTGAACGTCA AGGACGGTAA
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Protein sequence | MTIARRKSRE VTIGNVRIGG DNPVVVQSMT NTDTRDVEQT VEQINSLAEA GCEIVRVAVL NDDAAWAIRP IKDQVTVPLV ADIHFDHRLA VSALEAGVDA LRINPGNIGG QKNVDKVVDA AKAHGSVIRV GVNGGSLERD LVEKYCGPTP EAMVESALRH VRMLEDRNFD NIKISLKSSS VTDTVTAYRL LGQQCEYPLH IGVTEAGTML RGSVKSSVGI GILLWQGIGD TLRVSLTEDP VAEMAVAWEI LRSLGLRFRG PEIISCPTCG RTEIDLISLA GEIERRLQNE TQSFKVAVMG CVVNGPGEAR EADIGIAGGR DKGIIFRHGE VIRTVKGGSN LLAAFNEELD KFLAERQGR
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