Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2201 |
Symbol | |
ID | 3757211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2242216 |
End bp | 2243130 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637783091 |
Product | farnesyl-diphosphate synthase |
Protein accession | YP_388693 |
Protein GI | 78357244 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCATG CGGACGAAAT GACACCGCAG GCCATGAAGC AGCGGCTTGC GGCGGAAGCG CTGGAAGTGG AAGCGTATCT TGGCGGGTGC CTTAAAGGGC GGGGAATACC CTGTGATCTT CTGAAGGCCA TGGATTACAG CCTGCTTGCC GGCGGTAAGC GTCTGCGACC CGTGCTGTGC CTTACCACGG CCGGTCTTTT CGGTCTGGCG CGCGATGCGG TGCTGCCTTT TGCCGCGGCC ATCGAGCTTA TTCATACATA TTCTCTGGTG CACGACGACC TGCCCGCCAT GGATGATGAC GACCTGCGGC GCGGCATGCC ATCGAATCAT AAAAAATTCG GCGAGGCCAC AGCCATACTG GCCGGTGACG GCCTGCTTAC CGAAGCGTTT TGCCTGATGG CATCGGCGGG AGCTGCTGTG GAAGCCTCCA GAGTGCTTTC CGCCCTGTCT GTGGTGGCTG CTGCGGCAGG CGCCGGAGGC ATGGTGGGAG GTCAGATGCT GGATATGGAG TACACCGGCC GCGCTGATGT GTCTTTGGAC ATGCTTCGCG GTATGCACGC CATGAAAACA GGTGCGCTCA TCCGCTGTTC GTGTCTTGCC GGAGCCCTGC TTGCAGGCGC ACCGCATGAA GATGCCGAAC GGATATCCCA CTATGGAGAA GCCATTGGAG CCGCTTTTCA GATTGTTGAT GACATTCTTG ATGAAACCGG CGACGAGGCG ACACTGGGCA AGCCGGTGGG CAGTGACAGC GGGCAGGGCA AGAACACATA TCCGAGCCTG CTGGGGCTTG AGCGCAGCAG AGAGCTGGCG CAGCAGCAGG TGGATGCCGC CGTGGCCTGC CTGTCGGGGT ATGAAGGTGA AAATGCGCTT TTCCTCAGGG CACTTGCACA GTACATTGCC GATCGGGCCA TGTGA
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Protein sequence | MSHADEMTPQ AMKQRLAAEA LEVEAYLGGC LKGRGIPCDL LKAMDYSLLA GGKRLRPVLC LTTAGLFGLA RDAVLPFAAA IELIHTYSLV HDDLPAMDDD DLRRGMPSNH KKFGEATAIL AGDGLLTEAF CLMASAGAAV EASRVLSALS VVAAAAGAGG MVGGQMLDME YTGRADVSLD MLRGMHAMKT GALIRCSCLA GALLAGAPHE DAERISHYGE AIGAAFQIVD DILDETGDEA TLGKPVGSDS GQGKNTYPSL LGLERSRELA QQQVDAAVAC LSGYEGENAL FLRALAQYIA DRAM
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