Gene Dde_2201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2201 
Symbol 
ID3757211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2242216 
End bp2243130 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content60% 
IMG OID637783091 
Productfarnesyl-diphosphate synthase 
Protein accessionYP_388693 
Protein GI78357244 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCATG CGGACGAAAT GACACCGCAG GCCATGAAGC AGCGGCTTGC GGCGGAAGCG 
CTGGAAGTGG AAGCGTATCT TGGCGGGTGC CTTAAAGGGC GGGGAATACC CTGTGATCTT
CTGAAGGCCA TGGATTACAG CCTGCTTGCC GGCGGTAAGC GTCTGCGACC CGTGCTGTGC
CTTACCACGG CCGGTCTTTT CGGTCTGGCG CGCGATGCGG TGCTGCCTTT TGCCGCGGCC
ATCGAGCTTA TTCATACATA TTCTCTGGTG CACGACGACC TGCCCGCCAT GGATGATGAC
GACCTGCGGC GCGGCATGCC ATCGAATCAT AAAAAATTCG GCGAGGCCAC AGCCATACTG
GCCGGTGACG GCCTGCTTAC CGAAGCGTTT TGCCTGATGG CATCGGCGGG AGCTGCTGTG
GAAGCCTCCA GAGTGCTTTC CGCCCTGTCT GTGGTGGCTG CTGCGGCAGG CGCCGGAGGC
ATGGTGGGAG GTCAGATGCT GGATATGGAG TACACCGGCC GCGCTGATGT GTCTTTGGAC
ATGCTTCGCG GTATGCACGC CATGAAAACA GGTGCGCTCA TCCGCTGTTC GTGTCTTGCC
GGAGCCCTGC TTGCAGGCGC ACCGCATGAA GATGCCGAAC GGATATCCCA CTATGGAGAA
GCCATTGGAG CCGCTTTTCA GATTGTTGAT GACATTCTTG ATGAAACCGG CGACGAGGCG
ACACTGGGCA AGCCGGTGGG CAGTGACAGC GGGCAGGGCA AGAACACATA TCCGAGCCTG
CTGGGGCTTG AGCGCAGCAG AGAGCTGGCG CAGCAGCAGG TGGATGCCGC CGTGGCCTGC
CTGTCGGGGT ATGAAGGTGA AAATGCGCTT TTCCTCAGGG CACTTGCACA GTACATTGCC
GATCGGGCCA TGTGA
 
Protein sequence
MSHADEMTPQ AMKQRLAAEA LEVEAYLGGC LKGRGIPCDL LKAMDYSLLA GGKRLRPVLC 
LTTAGLFGLA RDAVLPFAAA IELIHTYSLV HDDLPAMDDD DLRRGMPSNH KKFGEATAIL
AGDGLLTEAF CLMASAGAAV EASRVLSALS VVAAAAGAGG MVGGQMLDME YTGRADVSLD
MLRGMHAMKT GALIRCSCLA GALLAGAPHE DAERISHYGE AIGAAFQIVD DILDETGDEA
TLGKPVGSDS GQGKNTYPSL LGLERSRELA QQQVDAAVAC LSGYEGENAL FLRALAQYIA
DRAM