| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2141 |
|---|
| Symbol | |
|---|
| ID | 3757150 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 2188240 |
|---|
| End bp | 2188818 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637783030 |
|---|
| Product | GDSL family lipase |
|---|
| Protein accession | YP_388633 |
|---|
| Protein GI | 78357184 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.336589 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTTCCGC CTTTTACCAT CCTTGCTCTG GGAGACAGCC TGACTGAAGG TTACGGCCTT
CCGGCGGGAT GTGCTGTTCC CGATGTTCTC CGGCAGCTGC TGGAAAAATC AGGTACCCGC
GTCCGCATTG TGAATCTGGG ACTTTCCGGC GATACAACAG CAGGCGGCCT CAGAAGACTG
CGGGCATGGC TTTCGCGGCA CCCGGCTCCC CATGCCGCCA TGGTGGAGCT GGGTGTCAAC
GATACATTCA TGGGACTGGA ATACGAAGAA ATTGAAGACA ACCTTGATGC CATCCTGCAG
ATATTGACAG CTCAGGATGT TCCGGTCCTT CTTACCTCCA TGCCGTTACT TTTTCCCGCA
CATGAAGAAG ACCGAAAGGC GTTTGACGCC ATCTATTCGA ATCTCGCCGC GCGTCACCGT
GTAATGCTTC ACCCCTTTTT TCCCGAGGGC GTTGCGGCAA ATCCTGCTCT GAGCCTGCCC
GACGGCATTC ACCCTGCCCC CGCAGGCGCA CATGCCATCG CCGAACATCT TCTGCCTGCC
GTACAAAAAC TGCTGTGCAA CGCCGCCGGC AAAGCCTGA
|
|---|
| Protein sequence | MLPPFTILAL GDSLTEGYGL PAGCAVPDVL RQLLEKSGTR VRIVNLGLSG DTTAGGLRRL
RAWLSRHPAP HAAMVELGVN DTFMGLEYEE IEDNLDAILQ ILTAQDVPVL LTSMPLLFPA
HEEDRKAFDA IYSNLAARHR VMLHPFFPEG VAANPALSLP DGIHPAPAGA HAIAEHLLPA
VQKLLCNAAG KA
|
|---|
| |