| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2138 |
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| Symbol | |
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| ID | 3757147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2185693 |
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| End bp | 2187399 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637783027 |
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| Product | periplasmic (NiFe) hydrogenase, large subunit, isozyme 1 |
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| Protein accession | YP_388630 |
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| Protein GI | 78357181 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGTT GCAGAGCAAA AACAGCCCCC GCCGGAATTC CGGTCACGCC CAAGAGCGAC
TACAGCGGTC CCATTGTAGT GGACCCGATT ACACGCATCG AAGGGCACCT GCGCATTGAG
GTGGAGGTTG AAAACGGCCG TATTAAAAAT GCATGGAGCA GTTCACAGCT GTTCCGCGGA
CTCGAAATAA TCCTCAAAGG ACGCGACCCT CGCGACGCAC AGCACTTCAC TCAGCGCTCA
TGCGGTGTTT GCACCTATGT CCATGCCCTT GCCTCCACCC GCTGCGTGGA CAACGCCGTG
GGAGTGCGCA TTCCCAAAAA CGCAACGCTG ATCCGCAACA TGGTGCTGGC CGCGCAGTAT
ATGCATGATC ATATCGTGCA CTTCTATCAT CTGCATGCGC TGGACTGGGT GGATGTAACC
AACGCACTTA AAGCCGACCC CGCTAAAGCC GCCAAGCTGG CGAACACCAT CTCGCCGCGC
AAAACCACGG CCGCTGACCT TAAAGCCGTA CAGGAACGCC TGACCAAGTT TGTAGAAAGC
GGCCAGCTCG GCCCCTTCAC CAATGCCTAC TTCCTCGGCG GGCATCCGTC TTACTATCTT
GAGCCCGAAG TGGACCTCAT TGCCACTGCC CACTATCTGG AGGCCCTGCG TCTGCAGGTG
AAAGCCGCCA GAGCCATGGC TGTGTTCGGT GCCAAAAACC CGCACACCCA GTTCACCGAC
GTAGGCGGTG TGACCTGCTA TGCCGCACTG ACCCCCGAAC GCATTGCAGA GTTCACTGCT
CTGTGGAAAG AAACAAAAGC ATTCATCGAC GAAGTATACA TTCCGGACCT GCTGGCAGTG
GCCGGTTCGT ACAAGGACTG GTCGGCCATC GGCGGTACCA GCAACTTCCT CACCTTCGGC
GAGTTCCCCA CAGATGAATA CGACCTGAAC AGCCGTTTCT TCCCGCAGGG AGCCATCTTC
AACCGCGACC TCTCGGCGGT GAAGGATTTC GACCCTTCGA GCATCATGGA GCATGTGCGC
TACAGCTGGT ATGAAGGCGA CAAAGCGCAC CACCCCTATG AAGGCGTGAC CGAACCCAAA
TACACCGGCC TGCGGGGCGA AAACGACCGC TACTCGTGGA TGAAAGCCCC CCGCTATCTT
GAAGAGCCCA TGGAAACGGG CCCGCTTGCA CAGGTGCTTA CCGCCTATGC CCGCGGCCAC
AAAGAAACAA AAGCGCTTGT TGACATGGTG CTGGGCAAAC TGGGCGTGGG ACCGGAAGCT
CTCTTCTCCA CGCTGGGACG CACCGCCGCA CGAGGCATTG AAACCGCCAT CATCGCCGAA
AAAACAGGTC AGATGATCAA CGAGTTGAAA GACAACATTG CCTCGGGTGA CACGACGATC
TACGAACCGT GGGAAATGCC CGACGAAGCG GAAGGTGTCG GATTTGTCAC CGCACCGCGC
GGCGCTCTGT CGCATTGGAT CAAAATCCGT GAAGGCAAAA TTGAAAACTT CCAGCTCGTG
GTTCCTTCCA CGTGGTCGCT GGGCCCGCGC TGTGCCAACG GCAAGCTGAG CCCTGTGGAA
GAAGCGCTGG TGGGCACCCC CGTTGCCGAC CCCAAACGTC CTGTGGAAAT CCTGCGTACC
GTGCATTCGT TTGACCCCTG CATCGCCTGC GGCGTGCACG TCATCGATTC GCAGACCAAC
GAGGTGCATA AGTTCAAAGT GCTGTAA
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| Protein sequence | MSGCRAKTAP AGIPVTPKSD YSGPIVVDPI TRIEGHLRIE VEVENGRIKN AWSSSQLFRG
LEIILKGRDP RDAQHFTQRS CGVCTYVHAL ASTRCVDNAV GVRIPKNATL IRNMVLAAQY
MHDHIVHFYH LHALDWVDVT NALKADPAKA AKLANTISPR KTTAADLKAV QERLTKFVES
GQLGPFTNAY FLGGHPSYYL EPEVDLIATA HYLEALRLQV KAARAMAVFG AKNPHTQFTD
VGGVTCYAAL TPERIAEFTA LWKETKAFID EVYIPDLLAV AGSYKDWSAI GGTSNFLTFG
EFPTDEYDLN SRFFPQGAIF NRDLSAVKDF DPSSIMEHVR YSWYEGDKAH HPYEGVTEPK
YTGLRGENDR YSWMKAPRYL EEPMETGPLA QVLTAYARGH KETKALVDMV LGKLGVGPEA
LFSTLGRTAA RGIETAIIAE KTGQMINELK DNIASGDTTI YEPWEMPDEA EGVGFVTAPR
GALSHWIKIR EGKIENFQLV VPSTWSLGPR CANGKLSPVE EALVGTPVAD PKRPVEILRT
VHSFDPCIAC GVHVIDSQTN EVHKFKVL
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