Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2129 |
Symbol | |
ID | 3757138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2177681 |
End bp | 2178196 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637783018 |
Product | CarD family transcriptional regulator |
Protein accession | YP_388621 |
Protein GI | 78357172 |
COG category | [K] Transcription |
COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000417327 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTGTTC CCGATCAACT CGTCGTCTAT CCTGCTCAGG GCGTGGGTAA AGTAGAACGC CTTGAATCTC AGGTTGTCGG CGGCGCAGAA GCCGAATTCT ACATCGTTCG TATTTTAAGC AACAATGTGA CCCTGATGGT TCCCGTAAAA AATGCGGTGA ACGTCGGACT GCGCGCGCTG TGCTCGGCAG AAGAAGGGCA AAAGATACTT GATAGCCTGC AGGACCGTTC GGACTTTACC GGCTATACCG GCCAGAACTG GAACAGAAGA TATCGTGAAT ATTCTGAAAA GCTGAAAAGC GGCAGTCTTG AGGATGTGGC ATACGTGCTC AAGGAACTGC TGCTTATCGG TAAAGACAAA GAGCTTTCTT TCGGTGAACG GCGTCTGCTT GAACAGTCTA TGGGGCTGAT TACCCTGGAA CTGGCTCATG CACTTGACAC CACTCAGGAA GACGTGAAAG CGCGTATTGA GGTTTTCTTC GAAGATGTGC TCCATCCCGA GGAAAATCCC GAATAG
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Protein sequence | MFVPDQLVVY PAQGVGKVER LESQVVGGAE AEFYIVRILS NNVTLMVPVK NAVNVGLRAL CSAEEGQKIL DSLQDRSDFT GYTGQNWNRR YREYSEKLKS GSLEDVAYVL KELLLIGKDK ELSFGERRLL EQSMGLITLE LAHALDTTQE DVKARIEVFF EDVLHPEENP E
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