Gene Dde_2121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2121 
SymbolcysS 
ID3757129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2170127 
End bp2171584 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content56% 
IMG OID637783009 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_388613 
Protein GI78357164 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00371034 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTAT ATAATACACT GACCCGAAAA AAAGAAAAAT TTATCCCCCA GCGTGAAGGT 
AAAGCCAGCG TCTACGTGTG CGGCATCACC GCCTACGACC TCTGCCATCT GGGCCATGCC
AGATCTTCTG TGGCTTTTGA TGTGCTGGTG CGCTACCTGC GTCATACGGG GCTTGATGTG
ACTTTTGTCC GCAACTTTAC CGACGTGGAC GATAAAATCA TCAAACGGGC CGGAGAGACA
GGGCTGACCA GCACCGAAGT GGCGGAAAAA TATATGGCGG CCTTCCATGA AGACATGGAC
AGGCTGGGTT GCCTGCGCGC CGACATAGAA CCCCGCTGCA CCCAGCATAT CGGAGAAATG
ATAGCCCTGT GCGAAGACCT GATCAGCAAA GGCAAAGCCT ACTCCACAGC CTCCGGCGAT
GTGTACTTCA GGGTCAGAAG CTTTGCGTCC TATGGTAAAC TTTCCGGGCG CGATGTGGAT
GACATGCGCT CCGGAGCACG GGTGGCACCG GGCGAAGAAA AGGAAGATCC GCTGGATTTC
GCTTTGTGGA AAAGTGCAAA ACCCGGAGAG CCGTACTGGG AAAGCCCCTG GGGCAACGGC
CGGCCCGGCT GGCATATCGA ATGTTCGGCC ATGAGCGAAA AACACCTGCC GCTGCCTCTT
GATATCCACG GCGGCGGTCA GGACCTTGTG TTTCCGCATC ACGAAAACGA AATAGCCCAG
ACCGAAGCCG CCACCGGTAA AGAATTTGCA CGCTACTGGG TGCATAACGG CTTTGTGCAG
GTCAATGCTG AAAAAATGTC AAAATCTCTC GGCAACTTCA GCACCATACG CGATATTCTG
CAAGGATACC TGCCGGAAAC TTTGCGCTAT TTCCTGCTGA CCAAGCATTA CAGAAGCCCC
ATAGACTTCA CCTTTGACGG TATGGATGAA GCGGAAAAAA ACCTGAGGCG CATCTACCAG
ACGCTGAATC TTGTGGAAAA CGAACTGCAG AAGACCAAGT GGTCCGCAGC GCCCCTGCCC
GAAGAAGTAC TCAGCGAAAT GGATGAAACA GAACGCGCGT GGAACGAAGC CATGGAAGAT
GACCTGAACA CAGCCGCAGC GCTGGGGCAT ATCTTCGGTC TCGTCCGTCT GGTAAACCGC
ATCATTGAAG ACAAGACCAT GCGCAAAAGC GCGCAGGCCC GTGATGCACT GCTGCGCATG
CAGAGCATGA TGGCCCGCTG GGGCGCAGTG CTCGGACTGT TTACCCGGCA GCCGGCAGAG
TTTCTGCGCG AAATGAGAGA CTGCCGCGCA GCCCGCAGGG ACGTTGATAC CGCCCGCGTT
GAAACGCTGC TTCTCGAACG GCAGGAAGCA CGCAAGGCCA AGGACTTTGA ACGGTCGGAC
GCCATCCGCG AAGAGCTGGC GCGTATGGGC GTCGAAGTAC AGGACACCCC CGCAGGAGCC
GCCTGGGACA TAGCCTGA
 
Protein sequence
MQLYNTLTRK KEKFIPQREG KASVYVCGIT AYDLCHLGHA RSSVAFDVLV RYLRHTGLDV 
TFVRNFTDVD DKIIKRAGET GLTSTEVAEK YMAAFHEDMD RLGCLRADIE PRCTQHIGEM
IALCEDLISK GKAYSTASGD VYFRVRSFAS YGKLSGRDVD DMRSGARVAP GEEKEDPLDF
ALWKSAKPGE PYWESPWGNG RPGWHIECSA MSEKHLPLPL DIHGGGQDLV FPHHENEIAQ
TEAATGKEFA RYWVHNGFVQ VNAEKMSKSL GNFSTIRDIL QGYLPETLRY FLLTKHYRSP
IDFTFDGMDE AEKNLRRIYQ TLNLVENELQ KTKWSAAPLP EEVLSEMDET ERAWNEAMED
DLNTAAALGH IFGLVRLVNR IIEDKTMRKS AQARDALLRM QSMMARWGAV LGLFTRQPAE
FLREMRDCRA ARRDVDTARV ETLLLERQEA RKAKDFERSD AIREELARMG VEVQDTPAGA
AWDIA