Gene Dde_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2089 
Symbol 
ID3757097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2135079 
End bp2136515 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content59% 
IMG OID637782977 
Producthypothetical protein 
Protein accessionYP_388581 
Protein GI78357132 
COG category[S] Function unknown 
COG ID[COG1690] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCCGC GCAACCAGAA CATCCGGCCG GTCAGAAAGG CGGAGAACCG CTGGCGCATC 
TACCCGGTCG GTACCATGAG AGTACCCGTG GACATTTTTG CTTCGGAAGC TCTCATATCG
GTCATGGATA CGGAAACAAT ACACCAGCTG ACAACTGCAG CCAGTCTGCC CGGTGTCGCC
GGTTCCGTCA TATGCATGCC CGATGCGCAC TCAGGTTATG GATTTCCCAT CGGGTGTGTG
GCCGGATTCT GTGCCGGTAA AGAAGGAATT ATTTCCGCCG GCGGTGTGGG ATACGACATC
GGGTGCGGTG TGCGCACTCT GCTGACAGAC ATACCTGCCG CAGAAGTGTA TGCGCGGCGC
GGCGAAATTG CGGACGCTCT GTTCCGTGCC ATTCCAGCGG GGCTGAAAGG AAGCAGTCAT
TTGTCGCTTA ACGCAGAAGA AATAAAACAG ATATTGCATG AAGGCGCCGC ATGGGCCGTA
CGCAACGGCA TGGGCGAAAA GGAAGACCTG TGGCATACAG AGGAAAACGG CTGCGTTGCC
GGAGCTGATG CAGCACAGGT CTCGACCGAA GCCCGGCAAA GACTCACCGG CCAGCTGGGT
ACTCTGGGGT CAGGCAACCA TTATCTTGAA ATCCAGATTG TCGACAGCAT CCACGATACC
GCTGCAGCGG CGCATTTCGG TCTTGCAGAA AACCAGATTG CCATCAGCAT CCACAGCGGC
TCACGGGGCA CAGGACACCA GATTGCCACT GACTACATAA AAGCCATGCA AAACGCCCTG
CCCGACGGCC ACCCCGCACC GGATCCTTCT CTGGCTTACG CCCCGCTGAC ATCAGACCTC
GGCCGCCGCT ATCTGGCCGC CATGAAAGCC GGCCGGAACT GCGCGCTGGC TAACAGGCAA
ACCATTGCCC ACATGGTGCG CAAAACGTTT CTGCGGCTGT TCCCCTCCTG CCGTATCACC
CAGCTGTATG ATGTTTCGCA CAACACCTGC AATGAAGAAC ACCACGTCAT CGAGGGCCAG
AGCAGACGGC TTTTTGTACA CCGCAAAGGA GCCACTCGTG CTCTGCCTTC CGGCCATGCA
GCCCTCGGCC CCCTGTTCGA TGCAACGGGA CAGCCTGTGC TTGTGGGCGG CAGCATGGGC
ACAGCATCAT GGATATTATG TGCCGCCCGG GGAGCAGAGG CCAGCATGTA CTCGGCCAAT
CACGGCGCCG GCAGACTGCT CAGCCGCGCT CAGGCACGCA AACGCCAGCA ACCCCGCAGT
CTTATGGATG CACTGAAGCA TGCCGGAATC TCGGTAAGAA CACACAGCCC GCAACTGCTG
GCGGAAGAGG CTCCCTTGGC CTATAAGGAT GTGGACCATG TGACTGATAC GGCCTGCGCG
ACAGGCATTG CCCGCAAAGT GGCAAGACTG CGCCCTCTGA TCTGCATAAA AGGATAA
 
Protein sequence
MSPRNQNIRP VRKAENRWRI YPVGTMRVPV DIFASEALIS VMDTETIHQL TTAASLPGVA 
GSVICMPDAH SGYGFPIGCV AGFCAGKEGI ISAGGVGYDI GCGVRTLLTD IPAAEVYARR
GEIADALFRA IPAGLKGSSH LSLNAEEIKQ ILHEGAAWAV RNGMGEKEDL WHTEENGCVA
GADAAQVSTE ARQRLTGQLG TLGSGNHYLE IQIVDSIHDT AAAAHFGLAE NQIAISIHSG
SRGTGHQIAT DYIKAMQNAL PDGHPAPDPS LAYAPLTSDL GRRYLAAMKA GRNCALANRQ
TIAHMVRKTF LRLFPSCRIT QLYDVSHNTC NEEHHVIEGQ SRRLFVHRKG ATRALPSGHA
ALGPLFDATG QPVLVGGSMG TASWILCAAR GAEASMYSAN HGAGRLLSRA QARKRQQPRS
LMDALKHAGI SVRTHSPQLL AEEAPLAYKD VDHVTDTACA TGIARKVARL RPLICIKG