| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1971 |
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| Symbol | |
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| ID | 3756977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2014955 |
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| End bp | 2015884 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637782857 |
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| Product | tyrosine recombinase XerD subunit |
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| Protein accession | YP_388463 |
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| Protein GI | 78357014 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000860406 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGAAAA ACTCTCAGAA AAATGAAGCT GCCGCCCCGC CCCACCCCAT TGTTGACAGC
TTTCTGCAGC ATCTGCTTAT TTCACGCGGA CTTTCTGAAA ACACGCTGTC GTCATACGGC
ACGGACCTTC AGAGCTTTCT CGATTTTCTG CACCATAAAA AAAGCCGGCT TGAGGATGTG
ACGGACCAGA GCCTGCTTTT ATATATCATG CACCTGCGGC GCAGAGGGCT ATCAAGCAAG
TCGCTTGCCC GCCAGCTTGC CGCGCTTCGC GGACTGTTCC GCTACGGCAC AGAACAGAAT
CTGCTGAGTG AAAATCCTTG CAGATTTCTT GAAAATCCGA AAATTCCCAA GTCATTGCCC
GAGTACCTCT CGCAGCAGGA AATTGCCGAA GTCCTCGCAC AGCCCGACCT TAAAGAAAAG
CTGGGCTTCC GCGACAGAAC CATGCTGGAG CTTCTGTACG CTGCGGGACT GCGGGTATCA
GAACTTATCA CTCTCAAGCC CCTCGATTTC GATCCGCTTA CAGGGCTTGT CCGTGTTTTC
GGAAAAGGGG CCAAAGAGCG CACGGTGCCG GTCCATGCAA CCGCGGCCCG TTTTCTTGGC
GCATACCTGC GCGACTGGCG CCCGGCTTTC AAACCCGTGG AAAATATTCT TTTCCTCAAC
CGCTCCGGCA AGGGGCTGAC CAGACAGGCA GTCTGGAAGA TTGTCAGGCG GCATGTGGCA
GATGCAGGCA TACACAGGCA GATATCACCG CACACTTTCC GGCACTCATT TGCCACCCAT
CTGCTGGAAG GCGGCGCCGA TCTGCGTACG GTCCAGCTGC TGCTGGGCCA TGCCGATATC
GCCGCCACCG AAATTTACAC CCACGTAGAA ACAGAACGCC TGCGCAGGAT ACACAAACAG
TTCCATCCGC GCTCCAAAAT CAAAATCTAG
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| Protein sequence | MLKNSQKNEA AAPPHPIVDS FLQHLLISRG LSENTLSSYG TDLQSFLDFL HHKKSRLEDV
TDQSLLLYIM HLRRRGLSSK SLARQLAALR GLFRYGTEQN LLSENPCRFL ENPKIPKSLP
EYLSQQEIAE VLAQPDLKEK LGFRDRTMLE LLYAAGLRVS ELITLKPLDF DPLTGLVRVF
GKGAKERTVP VHATAARFLG AYLRDWRPAF KPVENILFLN RSGKGLTRQA VWKIVRRHVA
DAGIHRQISP HTFRHSFATH LLEGGADLRT VQLLLGHADI AATEIYTHVE TERLRRIHKQ
FHPRSKIKI
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