Gene Dde_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1941 
Symbol 
ID3756945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1989255 
End bp1990442 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content53% 
IMG OID637782825 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_388433 
Protein GI78356984 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0596409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACATA CCGCAGAACG CTTTTCCGTG CTTTGTGTGG ATGATATGCC AGCCAATCTT 
GCCGTTCTTG ATGGTATCCT GCGCGACGAA TACATTGTGC TTACGGCTAC CAACGGGCAC
GATGCACTGG AAATCGCAAC GGGAGACTCT CCGCCGGATC TTATCCTGCT GGATGTGGTG
ATGCCTGGTA TGGACGGGTA TCAGGTTTGC CGGACGTTAA AAAAAATACC GGCTACTGCG
GCCATTCCGG TTATATTCGT GACATCACTG GATGATGAGG GCAATGAGGA AAAAGGGTTC
AGCCTGGGGG CTGTGGATTA CGTCCAGAAG CCTTTTTCTC AGCTTGTCAT CCGTGCACGG
GTAAGAGCGC ATCTGGTGAT ATACCGCACT CAGCGCATTC TTGAAAAGAC AGTCAGAGAG
CGGACAAGAG CTCTGGAACG TGCAAAAGAA AAAGCTGAAG AAGCCAACAG AGCCAAAACC
GTTTTTCTGG CTAACGTCAG CCATGAACTA CGCACTCCGC TTAACGGAGT GCTGGGGATG
GCACAACTGC TCTCCTCCAC TTCCATGAGC GGTGAACAGC GGTACCTTCT TGCCAGCCTG
AAGCAGTCGG CGGGCAGGCT GGGGTCGCTG GTTTCCGACA TCCTTGAACA CTCGAGCCTT
GAAGCAGGAA TGCTTCGTCC TTCCCAAGAT AATTTTGTTC TGAAGGAAGC TCTGGCTCCG
CTGATAAGGC ACTTTGGTGC TGTGGCGGAT AAAAAAAATA TTCTGTTCAC GCACACAGTG
CAGGATGGTG TTCCCCGCAC GCTTGCCGGA GACCGCGGGG CTTTGATCCA GATTCTGCAC
AATCTGCTTG ATAACGCATG CAACTACACC TCTGTCGGGA CTGTGGATCT GCATGTTGCT
CTCTGGACGT GCGAAAATAT CTGCACAGCC GACAACCGGA AAGCTGTCTG GTTGCGTTTT
GATGTGCGTG ATACAGGCAG CGGTATTCCG GAAGCCAAAG GGGGGGATAT CTTTGCTCCT
TTTTCCATAG CGGAGCATTT TCTTACAAAG CGTTTGGGCG GGGCCGGTCT GGGGCTGGCT
GTGGCCAGGC AGCTGGCAGA GCGTGATGGC GGGGAAATCA GCTTTGTCAG CAAAGAAGGT
GTGGGCAGCA CCTTCAGCGT GGTTCTTCCC TTTTTGCTTC CCTGCTGA
 
Protein sequence
MIHTAERFSV LCVDDMPANL AVLDGILRDE YIVLTATNGH DALEIATGDS PPDLILLDVV 
MPGMDGYQVC RTLKKIPATA AIPVIFVTSL DDEGNEEKGF SLGAVDYVQK PFSQLVIRAR
VRAHLVIYRT QRILEKTVRE RTRALERAKE KAEEANRAKT VFLANVSHEL RTPLNGVLGM
AQLLSSTSMS GEQRYLLASL KQSAGRLGSL VSDILEHSSL EAGMLRPSQD NFVLKEALAP
LIRHFGAVAD KKNILFTHTV QDGVPRTLAG DRGALIQILH NLLDNACNYT SVGTVDLHVA
LWTCENICTA DNRKAVWLRF DVRDTGSGIP EAKGGDIFAP FSIAEHFLTK RLGGAGLGLA
VARQLAERDG GEISFVSKEG VGSTFSVVLP FLLPC