| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1921 |
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| Symbol | |
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| ID | 3756924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1971583 |
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| End bp | 1974894 |
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| Gene Length | 3312 bp |
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| Protein Length | 1103 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637782805 |
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| Product | DNA primase-like |
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| Protein accession | YP_388413 |
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| Protein GI | 78356964 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0501943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATGG GCGGAACGGA TAACGTCAGG GAGTATTACC GGCTCGTCAC CGAGATGGAC
ATCGGTGACG TGGCCCGGGA ACTCCTGCCG GGACGGATCA CCCAGGAAAC CGGTCAGCGT
TTGATGTGCG ACTGCCCCAA CCATCAGAGC CAGTCGCGCC TGGCGCTGCA CGTGATGCTC
GACAAGCAGG GCTGGTACTG CTTCGGCTGC GGAGTCGGCG GTGACGTGCT GCAACTCGTG
GAGTTCATTC AGACGGGCTC GGTCACCGCC GGGCAATCCG GTCCGATGCC GGACAGCCAC
CGTCAGGCCC GGGACTATCT CGCCAAGAAG GCGGGCTTGC CGCCGCTGTC GCGCTATGGC
CTCAGCCAGG AGCGTCTCGC CCAGACGGAG GCCGACCGCG CCTTCGAACT GCGGGTCAAG
GACGCGCTGA CCTCGCTGGC CAGGCTTTAC CACGCCAGAC TCAAAGAGTC GCCGGAGGTC
CTCGACTGGC TGAAATCCAA ATACGCCCTG AGCGAGGAGA CCATCGACGA TCTCCTGATC
GGCTACGCGG ACAACGCGTC CGGCGCGGTC GCCCAACTGA CCGGGGGTGA GGACGGTTTC
TCCAAACGGG AGCTCGCCGC CACCGGCGCT TTCCGTCCCA CCAGCCAGGA CGGCCTGACG
CCATTTTTCG AGCGCCGGAT CGTCTTTCCC TACTGGAGCC GTGGCCGGGT GGTGTTCATG
ATCGGCCGCA AGACGCCGTG GACCCCGGAC GTGGGCTGGG AGCAAGGGAA ATACAAGAAA
CTGCCGGTTC ACGACGAGCA CCAGCGGCCT TACGTCGCCG ACTTCATCAA CAACGCGCTG
CTGTTCAACG AGGACTGCCT GCTGGCGAGG CCCGGCAAGG TGATCATCAC CGAGGGGGTG
ACCGATTGCC TGGCGCTGAT GCAACTGGGC CTGCCCACCG TATCGCCGGT CACCGTCCGC
ATCCGGGCCG CCGATTGGGA GCGCCTGATC CCCAAACTGC GCGGCGTCGA AACCGTCTAC
ATCTGCCAGG ACAACGAACT CTCCCAGGCC GGTCTCAAAG GGGCGCTGCA AACCGCTCGT
ACCCTGGCCG AACACAAGAT CGACACCCGC CTGGTGACGC TGCCTTTGTC GGAAACACAG
ATCTCGGCCC GGCAGGAGCT GACCGAACGG TTCAGCCTGA CGGCGAGCGT GGGGCCGAAG
GAGCTGGCCA AGCTGCTGGC GGGACGGCCC GCCGAGGAAA TCCAGGCGGC CGAGGCGCTT
CTCGCCACCG CCAAGATCGA CGTCAACGAT TACATTGCCG CCGGGCATAC CCGGGAGGAT
TTCGAACGTC TGCTCGCCGA GGCCAGCACG CCCATCGAGT TCGGCGTGCG CTCGCTGCCC
GAGGGCGCTG AAGAGGAGGA ACGCAACCGC CTGCTCGAAC CGATCCTGGG GGAGATTTCC
GAGCAGTCTC CCCTGGAACA GTCCCGCCTG CTGAAGCTGG TGCAGGAGCG CATCGGCGGT
GGCGTTTCGA TGGCCACCCT GAAAGAGCAG ATCCGCGCCA TCCAGAAGGA CCGCAAGGTC
GAGTTCCGCA ACGAAAAGAA AAAGGCCAAG CGGATGTCCG GCGCAATGCC CGGATCATGC
CGCGCCCGGG TCGACGAGGT GCTGATCGAC ACGGAACTGG AGAACGGTGC TCCCGACTAC
ACCCTGGCCG CCGAGGCTGC CTACGACTGG TTCAACGCCA ACGGTGCCCA GTTCTTTCAC
ACCCTGCAGG GCGAGCCGTT CATGTATTTC GACAACGCCA TCTACTGGAT GGATTCACCG
GACCGGGGCC GCAAGCGCCA TTACGCGGCC ATGCTCTACA AGCACACGGG TATGGTGCCG
ACCACGGGCG GCGGACGGAC ATTTTTCGAG GTGCTGCCCA GCCTGGCCAT GATCCGTGGC
CAGGTGCGCG ACCATTTCTC CTGGCTGCAC ACCGATGTGG CCTCCTACAC CGTCTATTTC
AATCTGAACA ACCCGGAGCA CGAGATCGCC AAGATCACCC CGGACGAGAT CCGGATCATG
AAGAACGGCG GCAACGAGGA CGGCATCATC CTGGACGGCT CGCGGAAGAT GAAGCCGCTG
AAATTCCTGC CCGACGCCGA CCTCGAAGAG GCGGACCGGC TCCTGGTCGA TCTGCTGGTG
GGCAACATGA CCTGTCCGCA GGGGGATCGC TTTCTCATCC TTTCCTGGCT CTCCTGCTTC
CTGCTGATCG ATTTCGCCGG GACGCGGCCC ATGACCCGCT TCGAGGGCTC GGCCGGATCG
GGCAAGACTA CCGCCAGCAA GATCACGTCG ACATTGCTTT ACGGCGAGCC CCAGCACAAG
AAGGCCACCG ACGCGGCGAA CTACACCGAT GGCTCGCAGA ACCCACTCAT CGTCCTCGAC
AACATCGAGG TCAAGCAGAT GACCGAGGAT CTGACCACCT TCATGCTGAC CAGCATCACC
GGCATCGCCA AGGAGAAACG CAAGAGCGGC ACCGACAGCG AGACCATCAC CGAGCGGACC
AAATGCCTGC TGAACACCAC CGGCATCGAG CCGCTGTGCG GGGAACTTTC GGAGATCCTG
TCGAGGTCCT TCGTCATCAA CTTCGACCTC GCCAACCAGG CCAGCGACTG CTTTCTGGAA
TCGGAGGTCA TCTCGGCCAT CCAGCAGAAC CGGGATCTGA TCATCTCGGC CATCATGAAG
CGGACCAGCC ATGTGCTGGC GATGATCCGG GACGGAGCCC AGAAACAGGT CATGCGCCTG
CTGCACCGAA CCATGCCGAC CCATGGCAAG CGCCGTTGCA ACGACTATCT GAGCCTGATG
TACCTGATGA TGCTGGCCGG GTCCGAGGAT CACGAGGTGA CTACCGGACT TGAGGATCTG
AGCCCGCTGT TCATCGAGCA GATACATTCC ATCAACGACA CCAGCCAGGA GATGGCCCGG
GAGTCGAACC CCATCGCCAC GGCGCTGGCG TCGCTCTTCC ACGCTTATCG GAACGCGGTG
GAGCTGGACG AGAAGGCCCG CTACGGCGAG GACGACCGGG CAAACCATGT GGTGGGGTTC
ATCGAACGCT ACCAGGTGAG GTTCGAGAAC GAGAACACCA TGGAACCGGT GTCTGCGGGA
AGGCTGCTCG CGGCTCTGCG CAGGGTCGGC CGGGAATTCA ACCTCGAGTT CGAATACAAG
AAGCCCGCCC AGCTCGGTCG GCGCATCAGC AACGACCTGG ACGTCATCCG GGACGCCGGG
TTCGACATCG ACCGGCAGCG CAACGCCCAC ACCAAGAACT TCGAGTACCG GATCAGTAGC
AAGGGTGTTT AA
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| Protein sequence | MSMGGTDNVR EYYRLVTEMD IGDVARELLP GRITQETGQR LMCDCPNHQS QSRLALHVML
DKQGWYCFGC GVGGDVLQLV EFIQTGSVTA GQSGPMPDSH RQARDYLAKK AGLPPLSRYG
LSQERLAQTE ADRAFELRVK DALTSLARLY HARLKESPEV LDWLKSKYAL SEETIDDLLI
GYADNASGAV AQLTGGEDGF SKRELAATGA FRPTSQDGLT PFFERRIVFP YWSRGRVVFM
IGRKTPWTPD VGWEQGKYKK LPVHDEHQRP YVADFINNAL LFNEDCLLAR PGKVIITEGV
TDCLALMQLG LPTVSPVTVR IRAADWERLI PKLRGVETVY ICQDNELSQA GLKGALQTAR
TLAEHKIDTR LVTLPLSETQ ISARQELTER FSLTASVGPK ELAKLLAGRP AEEIQAAEAL
LATAKIDVND YIAAGHTRED FERLLAEAST PIEFGVRSLP EGAEEEERNR LLEPILGEIS
EQSPLEQSRL LKLVQERIGG GVSMATLKEQ IRAIQKDRKV EFRNEKKKAK RMSGAMPGSC
RARVDEVLID TELENGAPDY TLAAEAAYDW FNANGAQFFH TLQGEPFMYF DNAIYWMDSP
DRGRKRHYAA MLYKHTGMVP TTGGGRTFFE VLPSLAMIRG QVRDHFSWLH TDVASYTVYF
NLNNPEHEIA KITPDEIRIM KNGGNEDGII LDGSRKMKPL KFLPDADLEE ADRLLVDLLV
GNMTCPQGDR FLILSWLSCF LLIDFAGTRP MTRFEGSAGS GKTTASKITS TLLYGEPQHK
KATDAANYTD GSQNPLIVLD NIEVKQMTED LTTFMLTSIT GIAKEKRKSG TDSETITERT
KCLLNTTGIE PLCGELSEIL SRSFVINFDL ANQASDCFLE SEVISAIQQN RDLIISAIMK
RTSHVLAMIR DGAQKQVMRL LHRTMPTHGK RRCNDYLSLM YLMMLAGSED HEVTTGLEDL
SPLFIEQIHS INDTSQEMAR ESNPIATALA SLFHAYRNAV ELDEKARYGE DDRANHVVGF
IERYQVRFEN ENTMEPVSAG RLLAALRRVG REFNLEFEYK KPAQLGRRIS NDLDVIRDAG
FDIDRQRNAH TKNFEYRISS KGV
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