Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1855 |
Symbol | |
ID | 3756858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 1904620 |
End bp | 1905558 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637782739 |
Product | Zn-dependent protease with chaperone function-like |
Protein accession | YP_388347 |
Protein GI | 78356898 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0553216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGCTCG CCTTTGCCAA TGTTGCATCA AGCAATGCCC TTCGGGTTTG GCGCGAAAGC CTTCTTCCTC TTTTGCTGGC GACCGGGCTG GCCGTGCTTC TTTCCGGCTG CGAGAATACC GACATGCAAC TGGCCACCGA GGCTGGAGTT GACGCCATTA AAGCCGTCAC CCTTTCCGAC CAGGATGTGG CGGAGCTGGC CGGAAAATCT TCCGCGTTAA TGGACAACGA ACATGCGGTC GCTCCGGCTG AAAACCACTA TGCACAGCGG TTGCGGTCGC TGGTCGGCGA TCTGCATGAG CAGGATGGCT ATACCTTCAA CTACAAGGTG TATTTGCGCG ACGAGGTGAA CGCCTTCGCC ATGGCTGACG GATCGATCCG GATTTTCAGC GGGCTAATGG ATATGCTTGA TGACGGCGAA CTTCGATTTG TGATCGGCCA CGAAATGGGT CACATCGTGA AACAGCACAC CGCCAACCAG TTGCGTCTTG CCTATGCCGC CAGCGCCGTG CGCAAGGGGC TGGCGGCGCA AGAAGGTGTG GTGGCGGATA TTGCCCGCTC GCAACTGGGA GGGTTGGTTC AACGCTTGAC TGCGGCGCAA TTCTCGCAGC TTGAAGAAAA GGTGGCGGAT GACTATGGCT TGTCGTTCCT CAAGGCGCGG GGTTATGCGC CGGAGGATGC GGTTTCGGCC TTGAACAAAC TCGCTGCTCT GGGCAGCGGC CATTCCTTTC TTTCCAGCCA TCCCGATCCG GCTTTGCGGG CCGAACGAAT AATGCTGCAG ATTCAAGGCA AGGCCCTTTC CATTGAAGAG ACACAGGAAA ATATACTGAC AATGATGAAA CAGAAAATGA TCGAATGGTA CAGCCTTTTG CGGGACATGG TCATGGGGCT GTTCAAGAGC CTCACTGGGC AAACTGATAT GAAAAGGGGA GTGGCATGA
|
Protein sequence | MMLAFANVAS SNALRVWRES LLPLLLATGL AVLLSGCENT DMQLATEAGV DAIKAVTLSD QDVAELAGKS SALMDNEHAV APAENHYAQR LRSLVGDLHE QDGYTFNYKV YLRDEVNAFA MADGSIRIFS GLMDMLDDGE LRFVIGHEMG HIVKQHTANQ LRLAYAASAV RKGLAAQEGV VADIARSQLG GLVQRLTAAQ FSQLEEKVAD DYGLSFLKAR GYAPEDAVSA LNKLAALGSG HSFLSSHPDP ALRAERIMLQ IQGKALSIEE TQENILTMMK QKMIEWYSLL RDMVMGLFKS LTGQTDMKRG VA
|
| |