Gene Dde_1812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1812 
Symbol 
ID3756815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1861778 
End bp1863100 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content58% 
IMG OID637782696 
ProductAtrazine chlorohydrolase 
Protein accessionYP_388304 
Protein GI78356855 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAAC ATTGTGACCG GATTATCAGA GCCGGTGTTC TTGTCACTCA GGACGAGCAG 
CGCCGTGTGC TTGGTGATGC GGCTGTGGCC GTGACCGGAG ACACCATAGC CGCCGTCGAC
CATGCTGATG TGATAGTCGC GGAATGGAGC ACCGACGCTG TAAGCGACCT TTCGGGCATG
CTCGTCATGC CGGGGCTGGT CAATGCCCAC ACCCATGTGG CGATGACTTT TCTGCGCGGG
CTTGCCGACG ATTTGCCGCT AATGCAGTGG CTCACCGAGC ATATTTTTCC GGTTGAAAAG
CATCTGAGTG CCGAGATAGT CGAAGTCAGC GCTCTGCTGG GCTGCGCCGA AATGGCTGCC
ACGGGCACTA CCACCCTGTG CGACATGTAC CTTATCGAAG ATGCCACATT CAAGGCCGTT
GACCGTGCGG GGCTGCGCAT GCAGGGCGGA GAAGGCCTTT TCGCCTTTCC TTCGCCGGCA
TATGCCTGCA TTGAAGATGC CTTTGAACTA GTACGCCGGC AGCATGACAG GTATTCCTCT
CACAGCCGCA TACGTCATGC GGTCATGCCT CACGCCGTAT ACACCAGCAA CCCTGAAATG
CTGGCCCGCT GCGCCGCGCT GGCCGGAGAA CTCGGTTGCG GGCTGCATAT CCATCTGGCC
GAAACCGCAG CCGAAACCGC GCAGTGCCTT GCGAGCTTCG GCAAACGCCC CATCCCTTAC
TGCCGTGATC TGGGCGTACT TTCGCCGCGT ACCACTGTGG CGCATGCGGT GGATGTAACC
GATGACGAGC TGGAGATACT GCGCGAATCC GGGATTTGCG TGGCACACAA CCCGGTAAGC
AATATGAAGC TTGCATCAGG TGCCGCACGT GTTCCGGAAA TGCTTGCCGC AGGTATCTGC
GTAGGCATTG GTACTGACGG TGCGGCCAGT AACAACGGGC TTAATATGTT TACGGAAATG
AAAACATGCG CCCTGCTGCA CAAGTTGCGC TATGCCGACC CGACCTGCGT GCCTGCGGCA
ACGGTGCTGG ACATGGCAAC CACGGGGGGT GCGAAGTGCG CCGGCTGGCC GGAAACCGGT
GCGCTGGTGC CGGGAGCCAA GGCAGATCTC ATTGCACTGG ATTTGTCAGC CCCGAATCTG
CAGCCTCTGT ATTCTGCGGT TTCTCATATT GTTTATGCCG CCACAGGGCA CGAAGTTACC
CACACCATGG TCGGCGGTGA ATTTGTATAT GAAAACGGAC GACACACCAG ATTTGATTAT
CCGGCCTTGC TGCGGGAAGT GGCCTCTATC CGCAGGTGGG TGCAGAAAAA AATCACGGGA
TGA
 
Protein sequence
MKQHCDRIIR AGVLVTQDEQ RRVLGDAAVA VTGDTIAAVD HADVIVAEWS TDAVSDLSGM 
LVMPGLVNAH THVAMTFLRG LADDLPLMQW LTEHIFPVEK HLSAEIVEVS ALLGCAEMAA
TGTTTLCDMY LIEDATFKAV DRAGLRMQGG EGLFAFPSPA YACIEDAFEL VRRQHDRYSS
HSRIRHAVMP HAVYTSNPEM LARCAALAGE LGCGLHIHLA ETAAETAQCL ASFGKRPIPY
CRDLGVLSPR TTVAHAVDVT DDELEILRES GICVAHNPVS NMKLASGAAR VPEMLAAGIC
VGIGTDGAAS NNGLNMFTEM KTCALLHKLR YADPTCVPAA TVLDMATTGG AKCAGWPETG
ALVPGAKADL IALDLSAPNL QPLYSAVSHI VYAATGHEVT HTMVGGEFVY ENGRHTRFDY
PALLREVASI RRWVQKKITG