| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1726 |
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| Symbol | |
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| ID | 3756724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1783902 |
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| End bp | 1785101 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637782606 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_388218 |
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| Protein GI | 78356769 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.061496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACACAT GGGCACTTCT TCTGGCGGCA GGCCAGAGCT CCAGAATAGC GGCAGCATGT
CCGGGCGTCC GCAAACAGTT TCTGCTTTGG CAGAACGCCC CTCTTTTCTG GCATTCCGCA
GTCATGCTTT CCCGCGTCAG TCGCATGCGG GGCATAATTT TTGTTTTTCC TGAAGACATG
CTGGAAGAGG CAACCGCCAT GGTCAGGGAA CTGGATGCAG GCCGGGCACT GGGCATACCA
TGGAAAGCCG TATCAGGCGG TGCCCGTCGG CAGGATTCCG TCGCCAGCGG TCTCGGGCAG
CTTCCGGCAG AGTGCGATAC GGTGCTTGTG CATGATGCAG CAAGACCTTT TGCCAGCGCG
TCACTTACCA ACAGCATTCT GGATGCGTTG CAGGCCGGAG CTGAAGGAGT GGTGCCGGCA
CTGGCCGTTA CCGACACTAT AAAGGTGGTA GAAGACGGCG CGGTGCTTTC AACTCCGGAC
AGGACAAAGC TCGTGGCCGT TCAGACTCCA CAGGGTTTCA GCCTTCAGGC GCTGCTCGGT
GCGCACCGTC ATTGCGCAGA AAAAGCACTG GCCGTCACCG ATGATGCATC CATGCTCGAA
CTGCTCGGAC AACATACTGT CATAACAGTG GAAGGTGAGG CATCCAACAT AAAAGTGACG
CATCCGGAGG ATCTGACCAT GCTGCATTCT TCAGAAAAAA AGAATATGCA AGTCCCCTGT
GTCGGATGGG GATACGACGT GCACCGGTTC GGTTCTGACG GCCGTCCCAT GAAACTTGGC
GGTGTGCCCA TAGCAGGCGG CCCGGGCGTT ATAGCGCATT CAGACGGTGA CGTGCTGCTG
CATGCCCTTA CAGATGCCGT GCTCGGCTGC ATGGGGCTGG GAGACATCGG CATGCTGTTT
CCCGACACAG ATGCGGCGTA CGATAATGCT GATAGTGCCG TCATGCTGAA CGAGGTGCTT
GAAAAAGCCA GAAATGCAGG CCTGCTGATT ACGCACGTTG ATCTGACGAT AATAACGCAG
ATTCCCAGAA TCACACCATG GCGCGACCAG ATACATAAAA ATATCTGCAG AATCACCCGC
CTGGACGCAT CTTCTGTCAA CCTGAAGGCG ACAACAGAAG AAAAACTGGG CTTCACCGGG
GAAAAGAAAG GGATAAAGGC AGTTGCGGCC GTGACCGCTC TGCGCCGGGT CTCTTCCTGA
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| Protein sequence | MHTWALLLAA GQSSRIAAAC PGVRKQFLLW QNAPLFWHSA VMLSRVSRMR GIIFVFPEDM
LEEATAMVRE LDAGRALGIP WKAVSGGARR QDSVASGLGQ LPAECDTVLV HDAARPFASA
SLTNSILDAL QAGAEGVVPA LAVTDTIKVV EDGAVLSTPD RTKLVAVQTP QGFSLQALLG
AHRHCAEKAL AVTDDASMLE LLGQHTVITV EGEASNIKVT HPEDLTMLHS SEKKNMQVPC
VGWGYDVHRF GSDGRPMKLG GVPIAGGPGV IAHSDGDVLL HALTDAVLGC MGLGDIGMLF
PDTDAAYDNA DSAVMLNEVL EKARNAGLLI THVDLTIITQ IPRITPWRDQ IHKNICRITR
LDASSVNLKA TTEEKLGFTG EKKGIKAVAA VTALRRVSS
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