| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1713 |
|---|
| Symbol | |
|---|
| ID | 3756711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1770105 |
|---|
| End bp | 1771883 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637782593 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_388205 |
|---|
| Protein GI | 78356756 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG3144] Flagellar hook-length control protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTTT TTCCCGCTTT TGCCGCAGAC CCCAAAGCCC CGTCCGGAAC GGGAGCGTCT
GCGCGCGGTG ACTATACCGC TTTCGCAGCT GCGTTGCATG CTGCCGTCGA AGCTCCCGCA
TCCTCCGCTC AAGGAGGGTT TAATTCGGCT TTCCGTTCTC TCAGTGCTGT TATAAACGGC
GACTCGGTGG TGCCTGACTC TCTGGACACC CCTTTTGTGC CTGAAAAAGC TGCTGCAAGA
GCCAACGATC TTTTCTCTTC CGTGCCTGCA TCTCCCGATA CACTGAAAGA CCTGCGCGAT
GCGCTTGCCG ATTTAGGGGT TTCCGAAGAG ACCCTCGATA AAATGATGAC GCAGGCCTCT
GCATCCGGCG GCATCAGCTG GAACCAGCTC ATGCAGATGC TGCAGCAGGA CATTACATCC
AGAACGGCTT TCCCCGCAGC GGAATTTGAT GCTCCCACCC GGAACGCATT TCAGTCTCTG
CTTCAGAAAC TCGGCTTTAC CGACAAGGAA GTGGGGCAGC TGACCGAAGA AGTGCAGGCT
GGTAATGTTT TCGGTTCATG GCAGGCGATT ACCCGCAAGC TCGATGCCGC ACCGGATTCT
GCGGTCTTTT CTCTGGACCG TTCGGAGCTG CAGGCCCTCG GCATTGCCAT GCGGCTCCCC
TCCGATGCTC TCAAACGCCT GCAGTCTGCA ATGGGCAATG CAGAAAGCAT GACCATCACC
CGTGACGGCC TGAAGCAGGC TCTGTCGGAA ATCTCCGGAA CAATTTCTCA GGTGCAGGAT
TCCATTGACA ATAAAGTCGA CCAGCTCAGA GACATCATAC GCCCTGCTAT GAACAAGGCT
CTGGAGGACA CGACAAAAGC CGCGCAGGCC GACAATCGGC AGACAAAAGA AACAGGCAAC
AGCCTGATCA TAATGCGCGA TACCACGCAA AGCAAAATAA CCGAAAGACT GCAGGCAGAA
GCCCATCCCT CCCGCGGGGC TGCGGAAGCT GCCGCAGCGG CTGAAAAAAA CCGACAGGGT
TTACGCGACA TCAAAACCGC AGAAAACGGC ACAGCTGATG CCGCGAGCAC GGATGCTGTG
TCCGGAGACG GGCTGCAGCG CGCGGCAAAA GCTGTGGAAG GCAGCAGTTT GTCCGACAAC
GGGCGCGAGC AGCAGCACGG GCACGAAGGC AGCAGAGACA AAGAGTCGCT GCACTTCAGA
AACGCCGCCG AACAGCTTAT CCGCCACGCC GAAGTACGTT CAGCCGAACC TCTGCTGCCC
GGCGCGCAGC AGCAGCGGGT AACACCGCAG GAACTGCAGC AGCAGGCCGC GGACAAAGCC
CGGTCCGAAA AAATACTTGA GCAGGTGGAA AAAGGCCTCA TCCAGACCAT GCGCAACGGC
CAGAACAGAA TGACCCTGCG CCTTGATCCG CCTGAACTGG GGCGCATAGC CGTGACGCTG
AGCGTTGTTA ACAAAGAGGT CACAGCAGTC ATCAGGCCGG AATCGCCCGA AGCCGTGAAA
GCCGTTAATG ACCAGCTGCA TCACCTGCGG GCCAGCCTTG AAAGGCAGGG ACTGAAAGTG
GAACGGCTGG AAGTACAGCA GCAGATGCAG GATACGTTTT CTTCACCTTC GTGGCAGGGG
GCCGAGCAGC ACAACGAAAC CCGCCAGAAG CACCAGTGGC AGCAGCGCGA ACAGCGTCTG
GCAGCCATAC GGCGCGAAGG CTCAGCTTTG GCCCAGGAAA TGCAAAGTCC TGCCCATAAG
GCAAGAATTA CCACCTCGTC TGTGGATATC ATAGCATAA
|
|---|
| Protein sequence | MQVFPAFAAD PKAPSGTGAS ARGDYTAFAA ALHAAVEAPA SSAQGGFNSA FRSLSAVING
DSVVPDSLDT PFVPEKAAAR ANDLFSSVPA SPDTLKDLRD ALADLGVSEE TLDKMMTQAS
ASGGISWNQL MQMLQQDITS RTAFPAAEFD APTRNAFQSL LQKLGFTDKE VGQLTEEVQA
GNVFGSWQAI TRKLDAAPDS AVFSLDRSEL QALGIAMRLP SDALKRLQSA MGNAESMTIT
RDGLKQALSE ISGTISQVQD SIDNKVDQLR DIIRPAMNKA LEDTTKAAQA DNRQTKETGN
SLIIMRDTTQ SKITERLQAE AHPSRGAAEA AAAAEKNRQG LRDIKTAENG TADAASTDAV
SGDGLQRAAK AVEGSSLSDN GREQQHGHEG SRDKESLHFR NAAEQLIRHA EVRSAEPLLP
GAQQQRVTPQ ELQQQAADKA RSEKILEQVE KGLIQTMRNG QNRMTLRLDP PELGRIAVTL
SVVNKEVTAV IRPESPEAVK AVNDQLHHLR ASLERQGLKV ERLEVQQQMQ DTFSSPSWQG
AEQHNETRQK HQWQQREQRL AAIRREGSAL AQEMQSPAHK ARITTSSVDI IA
|
|---|
| |