Gene Dde_1684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1684 
Symbol 
ID3756682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1736281 
End bp1738026 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content57% 
IMG OID637782564 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_388176 
Protein GI78356727 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0799101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTAG CTGATTATAA ACGTGAACGA AGCACGCTCA TCATCGCTGT TCTTACTTTG 
GTAACGGTGG GACTGAGTCT TATTGTTTCC ACCGGGCAGG TGCTTTCGCA GCAGGAAGAG
GCAGGAACCC AGCACCTCAT TCTTGCCTCG CGCTCTGTGC TTCAGGCTGT GGACAGTTCG
TTACGGCGCA ATATGACGAC CGATGCGCAG GGCGGGGCGA CATTCGGCGC AGGAGCAGCA
GAATTTTTCC GTGAACTGGA ACAGAGCGGA GAAGTGCTGT TTGTCGGGCT TATCGACAAG
CACGGCGGGC GCGTGCTCAC ATCGCGCAGC AGCGGAGAGT CCGGAACCAT CCTTTTTCCT
CCTGATGCGT TGCGCACTCT GGCACAGACC GGCGAGTGGC ATGGCAGAGT CGGCTTCGGG
CTGGCCAGCG CTTATGTATA CGGCAAAAGG ATTATTCCCG GTAACACCGG CAGCATGAGT
ATTGCGCGGG CGGAAACCGG CGAGCCTCTA CCCGCGTTTC TCGTGGTGGG GCTGGATATG
GCCAAGCATC AGGCCATCTA CCGGAAATTC CGGCAGAATG CTCTTTTTCA GGCTGCCTAT
ATTCTGGGAG CCGCTGTACT GATATGGGCT TTGGCCATGG GGCTTATCAA ACGCAGAGAA
ATGGCAGGCA AAGCACGTCA GCTTGAGCGT TTTCAGGTAA AGCTGCTGGA TAATCTGCCC
GACGGGCTTG TCACCATTGG TGAAAACGGC ACCATTCTGG CGGCTAATCC GGCGGCAAAC
GGCATATTGC AGGCGCGCGG AGAGGGACTG GCAGGCAAAC TGCTGGATGA TCTGCCCGAC
GATATTCTGC GCTGCCTTGC GGCTCCGGAA ACGGAAACGG CAGGGTGGCG TCAGGACAGT
GTCCGCGGAG CGCATCTTGA AATTCTGAGT GTACGGATGC CCGGCAGCAG CGAAACAGAC
GATGCTTCGC GCCTTGTGAT TATCCGTGAC AGAACCCAGA TACGTACATT GGAAAAAAGC
CTGAGCGATG CTGAAAAACT GGCTGCAGTG GGAACGCTGG CTGCCGGTGT GGCACATGAA
ATACGCAACC CGCTGAGCGC GCTGCGCGGG TTTGCCCAGT ATTTTGCCAA AAAATTCAAG
GACAGACATC CGGAAGAAGT TTACGCGCAG ACCATGGTGC GCGAGGCTGA CCGCCTGAAC
AGGGTCATCA CCGATCTTCT GTATCTTGCG CGTCCGCGGC GCGTTACCCC GCGGCTTGTC
CGGCTGCGTG CACTTGTTTC CGAGGTGGAA GATCTGGTCC GCTTTGATCT GGACGAACGC
AAGGTCAATA TGGTTGTCAG TCTGGGGCCT GAAGAGGTCT GGGCAGATGA GGATACCCTG
AAGCAGGCGG TACTCAATCT GGTACTGAAC AGCCTGGACG CGCTGAAGGA AACTGACGGT
GGTGCCCGAC AGGTGGATGT GGCATCGGGG CTGGCAAAAG ACGGTGTCTG GCTTTTTGTG
CGCGACACGG CCAACGGAAT GACTAAAGAA CAGGCCGAAC AGGCGTTTGA GCCTTTTTAC
ACCACCAAGA AAAAAGGAAC AGGGCTCGGG CTTGCCCTTG TGCACAAGAC CATGCGCGAC
CATGGCGGCA AGGCGATAAT CGATACTGCT CCGGGTCACG GAACCACTGT GGGGTTGTTT
TTTCCCGACC ATGACGATGA CGTTGCTGAC GATACCAATG AAGCTGACGC TGAGAGGGAT
TCATGA
 
Protein sequence
MEVADYKRER STLIIAVLTL VTVGLSLIVS TGQVLSQQEE AGTQHLILAS RSVLQAVDSS 
LRRNMTTDAQ GGATFGAGAA EFFRELEQSG EVLFVGLIDK HGGRVLTSRS SGESGTILFP
PDALRTLAQT GEWHGRVGFG LASAYVYGKR IIPGNTGSMS IARAETGEPL PAFLVVGLDM
AKHQAIYRKF RQNALFQAAY ILGAAVLIWA LAMGLIKRRE MAGKARQLER FQVKLLDNLP
DGLVTIGENG TILAANPAAN GILQARGEGL AGKLLDDLPD DILRCLAAPE TETAGWRQDS
VRGAHLEILS VRMPGSSETD DASRLVIIRD RTQIRTLEKS LSDAEKLAAV GTLAAGVAHE
IRNPLSALRG FAQYFAKKFK DRHPEEVYAQ TMVREADRLN RVITDLLYLA RPRRVTPRLV
RLRALVSEVE DLVRFDLDER KVNMVVSLGP EEVWADEDTL KQAVLNLVLN SLDALKETDG
GARQVDVASG LAKDGVWLFV RDTANGMTKE QAEQAFEPFY TTKKKGTGLG LALVHKTMRD
HGGKAIIDTA PGHGTTVGLF FPDHDDDVAD DTNEADAERD S