Gene Dde_1658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1658 
Symbol 
ID3756655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp1710310 
End bp1711410 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content55% 
IMG OID637782537 
Productpolysaccharide deacetylase family protein 
Protein accessionYP_388150 
Protein GI78356701 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0732576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAGA GTCTGCCGGT ACTCATGTAC CATTATGTCA GCAAGTGCGA AGGCTCCATA 
TCCGTTGATC CGCGTACATT CGAAGATCAT TGCAGAACCC TTGCGGCCCG CGGCTGGCAC 
GGCATAAGCC TGCACGAAGC AGAACAGTTT CTGCTTAACG GCACGCCCCT GCCCCGCAGA 
TCCGTTCTGA TAACCTTTGA TGACGGCTAT CTGGACAACT ACATATATGC CTGGCCCGTT 
CTTAAAAAAT ACGGGCACAA GGCCGTCATT TTCGCGGTTA CCTCTAAAAT TGAAAACCAC 
GCCACCCTGA GGCCGACCAT CGACGATATC CGCGAAGGAA GGGCCAGACC TGACGCTCTG 
CCTCAGGTAG ATAAACCTTT CATTGAAATT GCAGAAGGTG TGGCGGAACG TCAGGACACA 
TTTTTCAGCT GGAGCGAGGC GCGGGCCATG GAAGCTTCCG GCGTTATCAC CATTGCAGCG 
CACTCGCATT CTCATGCCAA CATTTTCTGC GGGCACGAAT ACTCAGGTTT TATCTTTCCC 
CGCGGCAGAG GGCGCACTTT TTATGAGGTT GAAGGTGAAA ACCTGTGGGG TATGCCGGCA 
TATCCCAAGG CTCCTGCGTT TTCCGGTAAT GCATTTCTGC CTTCTGCACG GCTGATGGAC 
ATAGTGCGCA GCACTGTGCC CCAGAACAAG ATTGAAGCCT ATAACTTTGC ACAGCAACAG 
GAAAACAGGG ACAGACTGCA ACGCAAGCTG GATGCGCTGT CCGCAACAGA GGCCGGCCGC 
TATGAAACAG ATGAGGAACG CGACGCCCGT TTTACAAAAG ACATCGCCGC CTGCAAGGCT 
TTGCTTGAAA AAGAACTGGG CCATGCAAGA CGGTCTTTCT GCTGGCCATG GGGCGTGGCG 
GGAACAGCGG CTAAACTTAT GGCGGAGCAG CAGGGTTTCA ATGTCTTCTT TACCACTGCT 
CCCGGCGCCA ACCCGCCGCA CTCTGCCGGT GCAGTGCACC GCTTCAAGGT AAAAAACAGG 
CCCGCCCGCT GGCTGCTCTC GCGGGTCAGG CTGTATGCAA ATCCCGCGGC AGCGCGGATT 
TATTCGTTTC TGCGCAGATA A
 
Protein sequence
MTKSLPVLMY HYVSKCEGSI SVDPRTFEDH CRTLAARGWH GISLHEAEQF LLNGTPLPRR 
SVLITFDDGY LDNYIYAWPV LKKYGHKAVI FAVTSKIENH ATLRPTIDDI REGRARPDAL 
PQVDKPFIEI AEGVAERQDT FFSWSEARAM EASGVITIAA HSHSHANIFC GHEYSGFIFP 
RGRGRTFYEV EGENLWGMPA YPKAPAFSGN AFLPSARLMD IVRSTVPQNK IEAYNFAQQQ 
ENRDRLQRKL DALSATEAGR YETDEERDAR FTKDIAACKA LLEKELGHAR RSFCWPWGVA 
GTAAKLMAEQ QGFNVFFTTA PGANPPHSAG AVHRFKVKNR PARWLLSRVR LYANPAAARI 
YSFLRR